The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea

In this study, the complete mitochondrial DNA sequence of a hagfish Eptatretus sp. Nan-Hai from a depth of 1000 m is presented. The complete sequence was determined using next-generation sequencing and long PCRs. The mitochondrial genome of Eptatretus sp. Nan-Hai is 17,538 bps in size and composed o...

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Autores principales: Lian, Chun-Ang, Li, Jun-Yuan, Zhu, Fang-Chao, Li, Jun, He, Li-Sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748873/
https://www.ncbi.nlm.nih.gov/pubmed/33366673
http://dx.doi.org/10.1080/23802359.2019.1711220
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author Lian, Chun-Ang
Li, Jun-Yuan
Zhu, Fang-Chao
Li, Jun
He, Li-Sheng
author_facet Lian, Chun-Ang
Li, Jun-Yuan
Zhu, Fang-Chao
Li, Jun
He, Li-Sheng
author_sort Lian, Chun-Ang
collection PubMed
description In this study, the complete mitochondrial DNA sequence of a hagfish Eptatretus sp. Nan-Hai from a depth of 1000 m is presented. The complete sequence was determined using next-generation sequencing and long PCRs. The mitochondrial genome of Eptatretus sp. Nan-Hai is 17,538 bps in size and composed of 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and one control region (D-loop). The base composition of mitochondrial genome is biased toward A + T content, at 67.21%, with GC skew of −0.35 and AT skew of −0.03. A phylogenetic tree revealed that within the genus Eptatretus, Eptatretus sp. Nan-Hai is closely related to Eptatretus atami.
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spelling pubmed-77488732020-12-22 The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea Lian, Chun-Ang Li, Jun-Yuan Zhu, Fang-Chao Li, Jun He, Li-Sheng Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial DNA sequence of a hagfish Eptatretus sp. Nan-Hai from a depth of 1000 m is presented. The complete sequence was determined using next-generation sequencing and long PCRs. The mitochondrial genome of Eptatretus sp. Nan-Hai is 17,538 bps in size and composed of 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and one control region (D-loop). The base composition of mitochondrial genome is biased toward A + T content, at 67.21%, with GC skew of −0.35 and AT skew of −0.03. A phylogenetic tree revealed that within the genus Eptatretus, Eptatretus sp. Nan-Hai is closely related to Eptatretus atami. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748873/ /pubmed/33366673 http://dx.doi.org/10.1080/23802359.2019.1711220 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lian, Chun-Ang
Li, Jun-Yuan
Zhu, Fang-Chao
Li, Jun
He, Li-Sheng
The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
title The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
title_full The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
title_fullStr The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
title_full_unstemmed The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
title_short The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
title_sort complete mitochondrial genome of a new deep-sea hagfish eptatretus sp. nan-hai (myxinidae: eptatretus) from the south china sea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748873/
https://www.ncbi.nlm.nih.gov/pubmed/33366673
http://dx.doi.org/10.1080/23802359.2019.1711220
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