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The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
Mahonia oiwakensis is a frequently-used traditional Chinese medicinal plant with efficient anti-tumor and anti-inflammatory ability. In this study, we assembled the complete chloroplast (cp) genome of M. oiwakensis. The complete cp genome of M. oiwakensis is 165,126 bp in length, and has a typical s...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748878/ https://www.ncbi.nlm.nih.gov/pubmed/33366706 http://dx.doi.org/10.1080/23802359.2020.1714500 |
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author | Xiao, Qunying Feng, Tu Yu, Yan |
author_facet | Xiao, Qunying Feng, Tu Yu, Yan |
author_sort | Xiao, Qunying |
collection | PubMed |
description | Mahonia oiwakensis is a frequently-used traditional Chinese medicinal plant with efficient anti-tumor and anti-inflammatory ability. In this study, we assembled the complete chloroplast (cp) genome of M. oiwakensis. The complete cp genome of M. oiwakensis is 165,126 bp in length, and has a typical structure with large (LSC 73,382 bp) and small (SSC 18,644 bp) single-copy regions separated by a pair of inverted repeats (IRs 36,550 bp) of large size. The M. oiwakensis cp genome contains 148 genes, of which 103 protein-coding genes, 37 tRNA genes, 8 rRNA genes. Phylogenetic analysis shows that M. oiwakensis closely clustered with Mahonia bealei, but were nested among three speices of Berberis, which robustly supports that Mahonia is not monophyletic, thus needs redefinition. |
format | Online Article Text |
id | pubmed-7748878 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77488782020-12-22 The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant Xiao, Qunying Feng, Tu Yu, Yan Mitochondrial DNA B Resour Mitogenome Announcement Mahonia oiwakensis is a frequently-used traditional Chinese medicinal plant with efficient anti-tumor and anti-inflammatory ability. In this study, we assembled the complete chloroplast (cp) genome of M. oiwakensis. The complete cp genome of M. oiwakensis is 165,126 bp in length, and has a typical structure with large (LSC 73,382 bp) and small (SSC 18,644 bp) single-copy regions separated by a pair of inverted repeats (IRs 36,550 bp) of large size. The M. oiwakensis cp genome contains 148 genes, of which 103 protein-coding genes, 37 tRNA genes, 8 rRNA genes. Phylogenetic analysis shows that M. oiwakensis closely clustered with Mahonia bealei, but were nested among three speices of Berberis, which robustly supports that Mahonia is not monophyletic, thus needs redefinition. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748878/ /pubmed/33366706 http://dx.doi.org/10.1080/23802359.2020.1714500 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xiao, Qunying Feng, Tu Yu, Yan The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant |
title | The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant |
title_full | The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant |
title_fullStr | The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant |
title_full_unstemmed | The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant |
title_short | The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant |
title_sort | complete chloroplast genome of mahonia oiwakensis (berberidaceae), a traditional chinese medicinal plant |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748878/ https://www.ncbi.nlm.nih.gov/pubmed/33366706 http://dx.doi.org/10.1080/23802359.2020.1714500 |
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