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The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant

Mahonia oiwakensis is a frequently-used traditional Chinese medicinal plant with efficient anti-tumor and anti-inflammatory ability. In this study, we assembled the complete chloroplast (cp) genome of M. oiwakensis. The complete cp genome of M. oiwakensis is 165,126 bp in length, and has a typical s...

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Autores principales: Xiao, Qunying, Feng, Tu, Yu, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748878/
https://www.ncbi.nlm.nih.gov/pubmed/33366706
http://dx.doi.org/10.1080/23802359.2020.1714500
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author Xiao, Qunying
Feng, Tu
Yu, Yan
author_facet Xiao, Qunying
Feng, Tu
Yu, Yan
author_sort Xiao, Qunying
collection PubMed
description Mahonia oiwakensis is a frequently-used traditional Chinese medicinal plant with efficient anti-tumor and anti-inflammatory ability. In this study, we assembled the complete chloroplast (cp) genome of M. oiwakensis. The complete cp genome of M. oiwakensis is 165,126 bp in length, and has a typical structure with large (LSC 73,382 bp) and small (SSC 18,644 bp) single-copy regions separated by a pair of inverted repeats (IRs 36,550 bp) of large size. The M. oiwakensis cp genome contains 148 genes, of which 103 protein-coding genes, 37 tRNA genes, 8 rRNA genes. Phylogenetic analysis shows that M. oiwakensis closely clustered with Mahonia bealei, but were nested among three speices of Berberis, which robustly supports that Mahonia is not monophyletic, thus needs redefinition.
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spelling pubmed-77488782020-12-22 The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant Xiao, Qunying Feng, Tu Yu, Yan Mitochondrial DNA B Resour Mitogenome Announcement Mahonia oiwakensis is a frequently-used traditional Chinese medicinal plant with efficient anti-tumor and anti-inflammatory ability. In this study, we assembled the complete chloroplast (cp) genome of M. oiwakensis. The complete cp genome of M. oiwakensis is 165,126 bp in length, and has a typical structure with large (LSC 73,382 bp) and small (SSC 18,644 bp) single-copy regions separated by a pair of inverted repeats (IRs 36,550 bp) of large size. The M. oiwakensis cp genome contains 148 genes, of which 103 protein-coding genes, 37 tRNA genes, 8 rRNA genes. Phylogenetic analysis shows that M. oiwakensis closely clustered with Mahonia bealei, but were nested among three speices of Berberis, which robustly supports that Mahonia is not monophyletic, thus needs redefinition. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748878/ /pubmed/33366706 http://dx.doi.org/10.1080/23802359.2020.1714500 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xiao, Qunying
Feng, Tu
Yu, Yan
The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
title The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
title_full The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
title_fullStr The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
title_full_unstemmed The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
title_short The complete chloroplast genome of Mahonia oiwakensis (Berberidaceae), a traditional Chinese medicinal plant
title_sort complete chloroplast genome of mahonia oiwakensis (berberidaceae), a traditional chinese medicinal plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748878/
https://www.ncbi.nlm.nih.gov/pubmed/33366706
http://dx.doi.org/10.1080/23802359.2020.1714500
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