The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia

Atractylodes macrocephala is one of the most commonly used herbs in China, which is famous for its high medicinal value. In this study, we analyzed and characterized the complete plastome sequence of A. macrocephala. Sequence analysis indicated that the entire genome is 153,265 bp in length, consist...

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Detalles Bibliográficos
Autores principales: Cai, Huixia, Chen, Chuan, Wang, Yichen, Wang, Hongyi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748879/
https://www.ncbi.nlm.nih.gov/pubmed/33366822
http://dx.doi.org/10.1080/23802359.2020.1719926
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author Cai, Huixia
Chen, Chuan
Wang, Yichen
Wang, Hongyi
author_facet Cai, Huixia
Chen, Chuan
Wang, Yichen
Wang, Hongyi
author_sort Cai, Huixia
collection PubMed
description Atractylodes macrocephala is one of the most commonly used herbs in China, which is famous for its high medicinal value. In this study, we analyzed and characterized the complete plastome sequence of A. macrocephala. Sequence analysis indicated that the entire genome is 153,265 bp in length, consisting of a large single-copy (LSC, 84,311 bp) and a small single-copy (SSC, 18,674 bp) region separated by a pair of inverted repeat (IR) regions of 25,140 bp for each. The genome contains 107 unique genes, including 80 different protein-coding genes, 23 tRNA genes, and 4 rRNA genes. The overall GC content of the genome is 37.7%. The phylogenetic analysis revealed a monophyletic Atractylodes and Cardueae. This research reports the complete plastome genome of Atractylodes macrocephala, which provides a better understanding of this important herb.
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spelling pubmed-77488792020-12-22 The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia Cai, Huixia Chen, Chuan Wang, Yichen Wang, Hongyi Mitochondrial DNA B Resour Mitogenome Announement Atractylodes macrocephala is one of the most commonly used herbs in China, which is famous for its high medicinal value. In this study, we analyzed and characterized the complete plastome sequence of A. macrocephala. Sequence analysis indicated that the entire genome is 153,265 bp in length, consisting of a large single-copy (LSC, 84,311 bp) and a small single-copy (SSC, 18,674 bp) region separated by a pair of inverted repeat (IR) regions of 25,140 bp for each. The genome contains 107 unique genes, including 80 different protein-coding genes, 23 tRNA genes, and 4 rRNA genes. The overall GC content of the genome is 37.7%. The phylogenetic analysis revealed a monophyletic Atractylodes and Cardueae. This research reports the complete plastome genome of Atractylodes macrocephala, which provides a better understanding of this important herb. Taylor & Francis 2020-01-31 /pmc/articles/PMC7748879/ /pubmed/33366822 http://dx.doi.org/10.1080/23802359.2020.1719926 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announement
Cai, Huixia
Chen, Chuan
Wang, Yichen
Wang, Hongyi
The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
title The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
title_full The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
title_fullStr The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
title_full_unstemmed The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
title_short The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
title_sort complete plastome sequence of atractylodes macrocephala (asteraceae: cardueae), an important medicinal plant in east asia
topic Mitogenome Announement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748879/
https://www.ncbi.nlm.nih.gov/pubmed/33366822
http://dx.doi.org/10.1080/23802359.2020.1719926
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