Cargando…

Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species

The complete mitochondrial genome of the wild Diptychus maculatus collected from Yeken River was determined using next generation sequencing. The mitogenome is a circular molecule 16,765 bp in length, including 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a control re...

Descripción completa

Detalles Bibliográficos
Autores principales: Niu, Jiangong, Zhang, Yu, Liu, Hong, Hu, Jiangwei, Cai, Lingang, Zhang, Renming, Zhang, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748880/
https://www.ncbi.nlm.nih.gov/pubmed/33366729
http://dx.doi.org/10.1080/23802359.2020.1715288
_version_ 1783625213952393216
author Niu, Jiangong
Zhang, Yu
Liu, Hong
Hu, Jiangwei
Cai, Lingang
Zhang, Renming
Zhang, Hui
author_facet Niu, Jiangong
Zhang, Yu
Liu, Hong
Hu, Jiangwei
Cai, Lingang
Zhang, Renming
Zhang, Hui
author_sort Niu, Jiangong
collection PubMed
description The complete mitochondrial genome of the wild Diptychus maculatus collected from Yeken River was determined using next generation sequencing. The mitogenome is a circular molecule 16,765 bp in length, including 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a control region. The TAS, central CSB, and CSB were detected in the control region. The gene contents of the mitogenome are identical to those observed in most bony fishes. The NJ phylogenetic tree showed that D. maculatus clustered into one separate branch which is close to genus Gymnodiptychus from the same subfamily.
format Online
Article
Text
id pubmed-7748880
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77488802020-12-22 Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species Niu, Jiangong Zhang, Yu Liu, Hong Hu, Jiangwei Cai, Lingang Zhang, Renming Zhang, Hui Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of the wild Diptychus maculatus collected from Yeken River was determined using next generation sequencing. The mitogenome is a circular molecule 16,765 bp in length, including 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a control region. The TAS, central CSB, and CSB were detected in the control region. The gene contents of the mitogenome are identical to those observed in most bony fishes. The NJ phylogenetic tree showed that D. maculatus clustered into one separate branch which is close to genus Gymnodiptychus from the same subfamily. Taylor & Francis 2020-01-20 /pmc/articles/PMC7748880/ /pubmed/33366729 http://dx.doi.org/10.1080/23802359.2020.1715288 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Niu, Jiangong
Zhang, Yu
Liu, Hong
Hu, Jiangwei
Cai, Lingang
Zhang, Renming
Zhang, Hui
Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species
title Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species
title_full Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species
title_fullStr Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species
title_full_unstemmed Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species
title_short Complete mitochondrial genome of the wild Diptychus maculatus (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species
title_sort complete mitochondrial genome of the wild diptychus maculatus (cypriniformes, cyprinidae, schizothoracinae) from yeken river using next generation sequencing and the phylogenetic relationship of cyprinidae species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748880/
https://www.ncbi.nlm.nih.gov/pubmed/33366729
http://dx.doi.org/10.1080/23802359.2020.1715288
work_keys_str_mv AT niujiangong completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies
AT zhangyu completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies
AT liuhong completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies
AT hujiangwei completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies
AT cailingang completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies
AT zhangrenming completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies
AT zhanghui completemitochondrialgenomeofthewilddiptychusmaculatuscypriniformescyprinidaeschizothoracinaefromyekenriverusingnextgenerationsequencingandthephylogeneticrelationshipofcyprinidaespecies