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Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification

The tumor stroma plays an important role in tumor progression and chemotherapeutic resistance; however, its role in colon cancer (CC) survival prognosis remains to be investigated. Here, we identified tumor stroma biomarkers and evaluated their role in CC prognosis stratification. Four independent d...

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Autores principales: Chen, Yong, Wang, Wenlong, Jiang, Bo, Yao, Lei, Xia, Fada, Li, Xinying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7750539/
https://www.ncbi.nlm.nih.gov/pubmed/33365318
http://dx.doi.org/10.3389/fmed.2020.584747
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author Chen, Yong
Wang, Wenlong
Jiang, Bo
Yao, Lei
Xia, Fada
Li, Xinying
author_facet Chen, Yong
Wang, Wenlong
Jiang, Bo
Yao, Lei
Xia, Fada
Li, Xinying
author_sort Chen, Yong
collection PubMed
description The tumor stroma plays an important role in tumor progression and chemotherapeutic resistance; however, its role in colon cancer (CC) survival prognosis remains to be investigated. Here, we identified tumor stroma biomarkers and evaluated their role in CC prognosis stratification. Four independent datasets containing a total of 1,313 patients were included in this study and were divided into training and testing sets. Stromal scores calculated using the estimation of stromal and immune cells in malignant tumors using expression data (ESTIMATE) algorithm were used to assess the tumor stroma level. Kaplan-Meier curves and the log-rank test were used to identify relationships between stromal score and prognosis. Tumor stroma biomarkers were identified by cross-validation of multiple datasets and bioinformatics methods. Cox proportional hazards regression models were constructed using four prognosis factors (age, tumor stage, the ESTIMATE stromal score, and the biomarker stromal score) in different combinations for prognosis prediction and compared. Patients with high stromal scores had a lower overall survival rate (p = 0.00016), higher risk of recurrence (p < 0.0001), and higher probability of chemotherapeutic resistance (p < 0.0001) than those with low scores. We identified 16 tumor stroma biomarkers and generated a new prognosis indicator termed the biomarker stromal score (ranging from 0 to 16) based on their expression levels. Its addition to an age/tumor stage-based model significantly improved prognosis prediction accuracy. In conclusion, the tumor stromal score is significantly negatively associated with CC survival prognosis, and the new tumor stroma indicator can improve CC prognosis stratification.
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spelling pubmed-77505392020-12-22 Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification Chen, Yong Wang, Wenlong Jiang, Bo Yao, Lei Xia, Fada Li, Xinying Front Med (Lausanne) Medicine The tumor stroma plays an important role in tumor progression and chemotherapeutic resistance; however, its role in colon cancer (CC) survival prognosis remains to be investigated. Here, we identified tumor stroma biomarkers and evaluated their role in CC prognosis stratification. Four independent datasets containing a total of 1,313 patients were included in this study and were divided into training and testing sets. Stromal scores calculated using the estimation of stromal and immune cells in malignant tumors using expression data (ESTIMATE) algorithm were used to assess the tumor stroma level. Kaplan-Meier curves and the log-rank test were used to identify relationships between stromal score and prognosis. Tumor stroma biomarkers were identified by cross-validation of multiple datasets and bioinformatics methods. Cox proportional hazards regression models were constructed using four prognosis factors (age, tumor stage, the ESTIMATE stromal score, and the biomarker stromal score) in different combinations for prognosis prediction and compared. Patients with high stromal scores had a lower overall survival rate (p = 0.00016), higher risk of recurrence (p < 0.0001), and higher probability of chemotherapeutic resistance (p < 0.0001) than those with low scores. We identified 16 tumor stroma biomarkers and generated a new prognosis indicator termed the biomarker stromal score (ranging from 0 to 16) based on their expression levels. Its addition to an age/tumor stage-based model significantly improved prognosis prediction accuracy. In conclusion, the tumor stromal score is significantly negatively associated with CC survival prognosis, and the new tumor stroma indicator can improve CC prognosis stratification. Frontiers Media S.A. 2020-12-07 /pmc/articles/PMC7750539/ /pubmed/33365318 http://dx.doi.org/10.3389/fmed.2020.584747 Text en Copyright © 2020 Chen, Wang, Jiang, Yao, Xia and Li. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Chen, Yong
Wang, Wenlong
Jiang, Bo
Yao, Lei
Xia, Fada
Li, Xinying
Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification
title Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification
title_full Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification
title_fullStr Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification
title_full_unstemmed Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification
title_short Integrating Tumor Stroma Biomarkers With Clinical Indicators for Colon Cancer Survival Stratification
title_sort integrating tumor stroma biomarkers with clinical indicators for colon cancer survival stratification
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7750539/
https://www.ncbi.nlm.nih.gov/pubmed/33365318
http://dx.doi.org/10.3389/fmed.2020.584747
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