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Multivariate Brain Functional Connectivity Through Regularized Estimators
Functional connectivity analyses are typically based on matrices containing bivariate measures of covariability, such as correlations. Although this has been a fruitful approach, it may not be the optimal strategy to fully explore the complex associations underlying brain activity. Here, we propose...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7753183/ https://www.ncbi.nlm.nih.gov/pubmed/33363451 http://dx.doi.org/10.3389/fnins.2020.569540 |
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author | Salvador, Raymond Verdolini, Norma Garcia-Ruiz, Beatriz Jiménez, Esther Sarró, Salvador Vilella, Elisabet Vieta, Eduard Canales-Rodríguez, Erick Jorge Pomarol-Clotet, Edith Voineskos, Aristotle N. |
author_facet | Salvador, Raymond Verdolini, Norma Garcia-Ruiz, Beatriz Jiménez, Esther Sarró, Salvador Vilella, Elisabet Vieta, Eduard Canales-Rodríguez, Erick Jorge Pomarol-Clotet, Edith Voineskos, Aristotle N. |
author_sort | Salvador, Raymond |
collection | PubMed |
description | Functional connectivity analyses are typically based on matrices containing bivariate measures of covariability, such as correlations. Although this has been a fruitful approach, it may not be the optimal strategy to fully explore the complex associations underlying brain activity. Here, we propose extending connectivity to multivariate functions relating to the temporal dynamics of a region with the rest of the brain. The main technical challenges of such an approach are multidimensionality and its associated risk of overfitting or even the non-uniqueness of model solutions. To minimize these risks, and as an alternative to the more common dimensionality reduction methods, we propose using two regularized multivariate connectivity models. On the one hand, simple linear functions of all brain nodes were fitted with ridge regression. On the other hand, a more flexible approach to avoid linearity and additivity assumptions was implemented through random forest regression. Similarities and differences between both methods and with simple averages of bivariate correlations (i.e., weighted global brain connectivity) were evaluated on a resting state sample of N = 173 healthy subjects. Results revealed distinct connectivity patterns from the two proposed methods, which were especially relevant in the age-related analyses where both ridge and random forest regressions showed significant patterns of age-related disconnection, almost completely absent from the much less sensitive global brain connectivity maps. On the other hand, the greater flexibility provided by the random forest algorithm allowed detecting sex-specific differences. The generic framework of multivariate connectivity implemented here may be easily extended to other types of regularized models. |
format | Online Article Text |
id | pubmed-7753183 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-77531832020-12-23 Multivariate Brain Functional Connectivity Through Regularized Estimators Salvador, Raymond Verdolini, Norma Garcia-Ruiz, Beatriz Jiménez, Esther Sarró, Salvador Vilella, Elisabet Vieta, Eduard Canales-Rodríguez, Erick Jorge Pomarol-Clotet, Edith Voineskos, Aristotle N. Front Neurosci Neuroscience Functional connectivity analyses are typically based on matrices containing bivariate measures of covariability, such as correlations. Although this has been a fruitful approach, it may not be the optimal strategy to fully explore the complex associations underlying brain activity. Here, we propose extending connectivity to multivariate functions relating to the temporal dynamics of a region with the rest of the brain. The main technical challenges of such an approach are multidimensionality and its associated risk of overfitting or even the non-uniqueness of model solutions. To minimize these risks, and as an alternative to the more common dimensionality reduction methods, we propose using two regularized multivariate connectivity models. On the one hand, simple linear functions of all brain nodes were fitted with ridge regression. On the other hand, a more flexible approach to avoid linearity and additivity assumptions was implemented through random forest regression. Similarities and differences between both methods and with simple averages of bivariate correlations (i.e., weighted global brain connectivity) were evaluated on a resting state sample of N = 173 healthy subjects. Results revealed distinct connectivity patterns from the two proposed methods, which were especially relevant in the age-related analyses where both ridge and random forest regressions showed significant patterns of age-related disconnection, almost completely absent from the much less sensitive global brain connectivity maps. On the other hand, the greater flexibility provided by the random forest algorithm allowed detecting sex-specific differences. The generic framework of multivariate connectivity implemented here may be easily extended to other types of regularized models. Frontiers Media S.A. 2020-12-08 /pmc/articles/PMC7753183/ /pubmed/33363451 http://dx.doi.org/10.3389/fnins.2020.569540 Text en Copyright © 2020 Salvador, Verdolini, Garcia-Ruiz, Jiménez, Sarró, Vilella, Vieta, Canales-Rodríguez, Pomarol-Clotet and Voineskos. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Salvador, Raymond Verdolini, Norma Garcia-Ruiz, Beatriz Jiménez, Esther Sarró, Salvador Vilella, Elisabet Vieta, Eduard Canales-Rodríguez, Erick Jorge Pomarol-Clotet, Edith Voineskos, Aristotle N. Multivariate Brain Functional Connectivity Through Regularized Estimators |
title | Multivariate Brain Functional Connectivity Through Regularized Estimators |
title_full | Multivariate Brain Functional Connectivity Through Regularized Estimators |
title_fullStr | Multivariate Brain Functional Connectivity Through Regularized Estimators |
title_full_unstemmed | Multivariate Brain Functional Connectivity Through Regularized Estimators |
title_short | Multivariate Brain Functional Connectivity Through Regularized Estimators |
title_sort | multivariate brain functional connectivity through regularized estimators |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7753183/ https://www.ncbi.nlm.nih.gov/pubmed/33363451 http://dx.doi.org/10.3389/fnins.2020.569540 |
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