Cargando…

Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence

BACKGROUND AND AIMS: Complete surgical resection with negative margin is one of the pillars in treatment of liver tumours. However, current techniques for intra‐operative assessment of tumour resection margins are time‐consuming and empirical. Mass spectrometry (MS) combined with artificial intellig...

Descripción completa

Detalles Bibliográficos
Autores principales: Giordano, Silvia, Takeda, Sen, Donadon, Matteo, Saiki, Hidekazu, Brunelli, Laura, Pastorelli, Roberta, Cimino, Matteo, Soldani, Cristiana, Franceschini, Barbara, Di Tommaso, Luca, Lleo, Ana, Yoshimura, Kentaro, Nakajima, Hiroki, Torzilli, Guido, Davoli, Enrico
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7754124/
https://www.ncbi.nlm.nih.gov/pubmed/32662575
http://dx.doi.org/10.1111/liv.14604
_version_ 1783626130515820544
author Giordano, Silvia
Takeda, Sen
Donadon, Matteo
Saiki, Hidekazu
Brunelli, Laura
Pastorelli, Roberta
Cimino, Matteo
Soldani, Cristiana
Franceschini, Barbara
Di Tommaso, Luca
Lleo, Ana
Yoshimura, Kentaro
Nakajima, Hiroki
Torzilli, Guido
Davoli, Enrico
author_facet Giordano, Silvia
Takeda, Sen
Donadon, Matteo
Saiki, Hidekazu
Brunelli, Laura
Pastorelli, Roberta
Cimino, Matteo
Soldani, Cristiana
Franceschini, Barbara
Di Tommaso, Luca
Lleo, Ana
Yoshimura, Kentaro
Nakajima, Hiroki
Torzilli, Guido
Davoli, Enrico
author_sort Giordano, Silvia
collection PubMed
description BACKGROUND AND AIMS: Complete surgical resection with negative margin is one of the pillars in treatment of liver tumours. However, current techniques for intra‐operative assessment of tumour resection margins are time‐consuming and empirical. Mass spectrometry (MS) combined with artificial intelligence (AI) is useful for classifying tissues and provides valuable prognostic information. The aim of this study was to develop a MS‐based system for rapid and objective liver cancer identification and classification. METHODS: A large dataset derived from 222 patients with hepatocellular carcinoma (HCC, 117 tumours and 105 non‐tumours) and 96 patients with mass‐forming cholangiocarcinoma (MFCCC, 50 tumours and 46 non‐tumours) were analysed by Probe Electrospray Ionization (PESI) MS. AI by means of support vector machine (SVM) and random forest (RF) algorithms was employed. For each classifier, sensitivity, specificity and accuracy were calculated. RESULTS: The overall diagnostic accuracy exceeded 94% in both the AI algorithms. For identification of HCC vs non‐tumour tissue, RF was the best, with 98.2% accuracy, 97.4% sensitivity and 99% specificity. For MFCCC vs non‐tumour tissue, both algorithms gave 99.0% accuracy, 98% sensitivity and 100% specificity. CONCLUSIONS: The herein reported MS‐based system, combined with AI, permits liver cancer identification with high accuracy. Its bench‐top size, minimal sample preparation and short working time are the main advantages. From diagnostics to therapeutics, it has the potential to influence the decision‐making process in real‐time with the ultimate aim of improving cancer patient cure.
format Online
Article
Text
id pubmed-7754124
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-77541242020-12-23 Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence Giordano, Silvia Takeda, Sen Donadon, Matteo Saiki, Hidekazu Brunelli, Laura Pastorelli, Roberta Cimino, Matteo Soldani, Cristiana Franceschini, Barbara Di Tommaso, Luca Lleo, Ana Yoshimura, Kentaro Nakajima, Hiroki Torzilli, Guido Davoli, Enrico Liver Int Liver Cancer BACKGROUND AND AIMS: Complete surgical resection with negative margin is one of the pillars in treatment of liver tumours. However, current techniques for intra‐operative assessment of tumour resection margins are time‐consuming and empirical. Mass spectrometry (MS) combined with artificial intelligence (AI) is useful for classifying tissues and provides valuable prognostic information. The aim of this study was to develop a MS‐based system for rapid and objective liver cancer identification and classification. METHODS: A large dataset derived from 222 patients with hepatocellular carcinoma (HCC, 117 tumours and 105 non‐tumours) and 96 patients with mass‐forming cholangiocarcinoma (MFCCC, 50 tumours and 46 non‐tumours) were analysed by Probe Electrospray Ionization (PESI) MS. AI by means of support vector machine (SVM) and random forest (RF) algorithms was employed. For each classifier, sensitivity, specificity and accuracy were calculated. RESULTS: The overall diagnostic accuracy exceeded 94% in both the AI algorithms. For identification of HCC vs non‐tumour tissue, RF was the best, with 98.2% accuracy, 97.4% sensitivity and 99% specificity. For MFCCC vs non‐tumour tissue, both algorithms gave 99.0% accuracy, 98% sensitivity and 100% specificity. CONCLUSIONS: The herein reported MS‐based system, combined with AI, permits liver cancer identification with high accuracy. Its bench‐top size, minimal sample preparation and short working time are the main advantages. From diagnostics to therapeutics, it has the potential to influence the decision‐making process in real‐time with the ultimate aim of improving cancer patient cure. John Wiley and Sons Inc. 2020-08-04 2020-12 /pmc/articles/PMC7754124/ /pubmed/32662575 http://dx.doi.org/10.1111/liv.14604 Text en © 2020 The Authors. Liver International published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Liver Cancer
Giordano, Silvia
Takeda, Sen
Donadon, Matteo
Saiki, Hidekazu
Brunelli, Laura
Pastorelli, Roberta
Cimino, Matteo
Soldani, Cristiana
Franceschini, Barbara
Di Tommaso, Luca
Lleo, Ana
Yoshimura, Kentaro
Nakajima, Hiroki
Torzilli, Guido
Davoli, Enrico
Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
title Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
title_full Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
title_fullStr Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
title_full_unstemmed Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
title_short Rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
title_sort rapid automated diagnosis of primary hepatic tumour by mass spectrometry and artificial intelligence
topic Liver Cancer
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7754124/
https://www.ncbi.nlm.nih.gov/pubmed/32662575
http://dx.doi.org/10.1111/liv.14604
work_keys_str_mv AT giordanosilvia rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT takedasen rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT donadonmatteo rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT saikihidekazu rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT brunellilaura rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT pastorelliroberta rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT ciminomatteo rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT soldanicristiana rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT franceschinibarbara rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT ditommasoluca rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT lleoana rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT yoshimurakentaro rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT nakajimahiroki rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT torzilliguido rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence
AT davolienrico rapidautomateddiagnosisofprimaryhepatictumourbymassspectrometryandartificialintelligence