Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)

Murrah buffalo (Bubalus bubalis Linnaeus, 1758 breed Murrah, MB) is a most productive water buffalo breed. It is the first time that the complete mitochondrial genome sequence of the MB was reported. The total length of the mtDNA is 16,359 bp, It contains the typical structure, including 22 transfer...

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Autores principales: Lin, Qian, Li, Meng-Wei, Wang, Yan-Zhou, Qiu, Hua-Jiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755322/
https://www.ncbi.nlm.nih.gov/pubmed/33426275
http://dx.doi.org/10.1080/23802359.2019.1704181
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author Lin, Qian
Li, Meng-Wei
Wang, Yan-Zhou
Qiu, Hua-Jiao
author_facet Lin, Qian
Li, Meng-Wei
Wang, Yan-Zhou
Qiu, Hua-Jiao
author_sort Lin, Qian
collection PubMed
description Murrah buffalo (Bubalus bubalis Linnaeus, 1758 breed Murrah, MB) is a most productive water buffalo breed. It is the first time that the complete mitochondrial genome sequence of the MB was reported. The total length of the mtDNA is 16,359 bp, It contains the typical structure, including 22 transfer RNA genes, 2 ribosomal RNA genes, 13 protein-coding genes and 1 non-coding control region (D-loop region). The overall composition of the mtDNA was estimated to be 33.00% for A, 26.32% for T, 26.71% for C and 13.97% for G. Phylogenetic analyses using N-J computational algorithms showed that the analyzed 18 Ruminantia species are divided into four major clades: Bovidae, Cervidae, Giraffidae and Atilocapridae. In addition, our work confirmed that MB and Bubalus bubalis isolate India 4 have a close genetic relationship.
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spelling pubmed-77553222021-01-08 Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae) Lin, Qian Li, Meng-Wei Wang, Yan-Zhou Qiu, Hua-Jiao Mitochondrial DNA B Resour Mitogenome Announcement Murrah buffalo (Bubalus bubalis Linnaeus, 1758 breed Murrah, MB) is a most productive water buffalo breed. It is the first time that the complete mitochondrial genome sequence of the MB was reported. The total length of the mtDNA is 16,359 bp, It contains the typical structure, including 22 transfer RNA genes, 2 ribosomal RNA genes, 13 protein-coding genes and 1 non-coding control region (D-loop region). The overall composition of the mtDNA was estimated to be 33.00% for A, 26.32% for T, 26.71% for C and 13.97% for G. Phylogenetic analyses using N-J computational algorithms showed that the analyzed 18 Ruminantia species are divided into four major clades: Bovidae, Cervidae, Giraffidae and Atilocapridae. In addition, our work confirmed that MB and Bubalus bubalis isolate India 4 have a close genetic relationship. Taylor & Francis 2020-01-10 /pmc/articles/PMC7755322/ /pubmed/33426275 http://dx.doi.org/10.1080/23802359.2019.1704181 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Lin, Qian
Li, Meng-Wei
Wang, Yan-Zhou
Qiu, Hua-Jiao
Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
title Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
title_full Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
title_fullStr Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
title_full_unstemmed Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
title_short Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
title_sort determination and phylogenetic analysis of the complete mitochondrial genome of bubalus bubalis linnaeus, 1758 breed murrah (artiodactyla: bovidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755322/
https://www.ncbi.nlm.nih.gov/pubmed/33426275
http://dx.doi.org/10.1080/23802359.2019.1704181
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