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Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma
BACKGROUND: Despite considerable efforts, the pathogenic mechanisms of asthma are still incompletely understood, due to its heterogeneous nature. However, metabolomics can offer a global view of a biological system, making it a valuable tool for further elucidation of mechanisms and biomarker discov...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755329/ https://www.ncbi.nlm.nih.gov/pubmed/33376359 http://dx.doi.org/10.2147/JAA.S281198 |
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author | Li, Shuxian Liu, Jinling Zhou, Junfen Wang, Yingshuo Jin, Fang Chen, Xiaoyang Yang, Jun Chen, Zhimin |
author_facet | Li, Shuxian Liu, Jinling Zhou, Junfen Wang, Yingshuo Jin, Fang Chen, Xiaoyang Yang, Jun Chen, Zhimin |
author_sort | Li, Shuxian |
collection | PubMed |
description | BACKGROUND: Despite considerable efforts, the pathogenic mechanisms of asthma are still incompletely understood, due to its heterogeneous nature. However, metabolomics can offer a global view of a biological system, making it a valuable tool for further elucidation of mechanisms and biomarker discovery in asthma. METHODS: GC-MS–based metabolomic analysis was conducted for comparison of urine metabolic profiles between asthmatic children (n=30) and healthy controls (n=30). RESULTS: An orthogonal projections to latent structures discriminant–analysis model revealed a clear separation of the asthma and control groups (R(2)(x)=0.137, R(2)(y)=0.947, Q(2)=0.82). A total of 20 differential metabolites were identified as discriminant factors, of which eleven were significantly increased and nine decreased in the asthma group compared to the control group. Pathway-enrichment analysis based on these differential metabolites indicated that sphingolipid metabolism, protein biosynthesis, and citric acid cycle were strongly associated with asthma. Among the identified metabolites, 2-hydroxybutanoic acid showed excellent discriminatory performance for distinguishing asthma from healthy controls, with an AUC of 0.969. CONCLUSION: Our study revealed significant changes in the urine metabolome of asthma patients. Several perturbed pathways (eg, sphingolipid metabolism and citric acid cycle) may be related to asthma pathogenesis, and 2-hydroxybutanoic acid could serve as a potential biomarker for asthma diagnosis. |
format | Online Article Text |
id | pubmed-7755329 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-77553292020-12-28 Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma Li, Shuxian Liu, Jinling Zhou, Junfen Wang, Yingshuo Jin, Fang Chen, Xiaoyang Yang, Jun Chen, Zhimin J Asthma Allergy Original Research BACKGROUND: Despite considerable efforts, the pathogenic mechanisms of asthma are still incompletely understood, due to its heterogeneous nature. However, metabolomics can offer a global view of a biological system, making it a valuable tool for further elucidation of mechanisms and biomarker discovery in asthma. METHODS: GC-MS–based metabolomic analysis was conducted for comparison of urine metabolic profiles between asthmatic children (n=30) and healthy controls (n=30). RESULTS: An orthogonal projections to latent structures discriminant–analysis model revealed a clear separation of the asthma and control groups (R(2)(x)=0.137, R(2)(y)=0.947, Q(2)=0.82). A total of 20 differential metabolites were identified as discriminant factors, of which eleven were significantly increased and nine decreased in the asthma group compared to the control group. Pathway-enrichment analysis based on these differential metabolites indicated that sphingolipid metabolism, protein biosynthesis, and citric acid cycle were strongly associated with asthma. Among the identified metabolites, 2-hydroxybutanoic acid showed excellent discriminatory performance for distinguishing asthma from healthy controls, with an AUC of 0.969. CONCLUSION: Our study revealed significant changes in the urine metabolome of asthma patients. Several perturbed pathways (eg, sphingolipid metabolism and citric acid cycle) may be related to asthma pathogenesis, and 2-hydroxybutanoic acid could serve as a potential biomarker for asthma diagnosis. Dove 2020-12-18 /pmc/articles/PMC7755329/ /pubmed/33376359 http://dx.doi.org/10.2147/JAA.S281198 Text en © 2020 Li et al. http://creativecommons.org/licenses/by-nc/3.0/ This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Li, Shuxian Liu, Jinling Zhou, Junfen Wang, Yingshuo Jin, Fang Chen, Xiaoyang Yang, Jun Chen, Zhimin Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma |
title | Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma |
title_full | Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma |
title_fullStr | Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma |
title_full_unstemmed | Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma |
title_short | Urinary Metabolomic Profiling Reveals Biological Pathways and Predictive Signatures Associated with Childhood Asthma |
title_sort | urinary metabolomic profiling reveals biological pathways and predictive signatures associated with childhood asthma |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755329/ https://www.ncbi.nlm.nih.gov/pubmed/33376359 http://dx.doi.org/10.2147/JAA.S281198 |
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