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New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy
COVID-19 pandemic in Italy displayed a spatial distribution that made the tracking of its time course quite difficult. The most relevant anomaly was the marked spatial heterogeneity of COVID-19 diffusion. Lombardia region accounted for around 60% of fatal cases (while hosting 15% of Italian populati...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755893/ https://www.ncbi.nlm.nih.gov/pubmed/33353964 http://dx.doi.org/10.1038/s41598-020-79039-x |
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author | Bizzarri, Mariano Di Traglia, Mario Giuliani, Alessandro Vestri, Annarita Fedeli, Valeria Prestininzi, Alberto |
author_facet | Bizzarri, Mariano Di Traglia, Mario Giuliani, Alessandro Vestri, Annarita Fedeli, Valeria Prestininzi, Alberto |
author_sort | Bizzarri, Mariano |
collection | PubMed |
description | COVID-19 pandemic in Italy displayed a spatial distribution that made the tracking of its time course quite difficult. The most relevant anomaly was the marked spatial heterogeneity of COVID-19 diffusion. Lombardia region accounted for around 60% of fatal cases (while hosting 15% of Italian population). Moreover, 86% of fatalities concentrated in four Northern Italy regions. The ‘explosive’ outbreak of COVID-19 in Lombardia at the very beginning of pandemic fatally biased the R-like statistics routinely used to control the disease dynamics. To (at least partially) overcome this bias, we propose a new index RI = dH/dI (daily derivative ratio of H and I, given H = Healed and I = Infected), corresponding to the ratio between healed and infected patients relative daily changes. The proposed index is less flawed than R by the uncertainty related to the estimated number of infected persons and allows to follow (and possibly forecast) epidemic dynamics in a largely model-independent way. To analyze the dynamics of the epidemic, starting from the beginning of the virus spreading—when data are insufficient to make an estimate by adopting SIR model—a "sigmoidal family with delay" logistic model was introduced. That approach allowed in estimating the epidemic peak using the few data gathered even before mid-March. Based on this analysis, the peak was correctly predicted to occur by end of April. Analytical methodology of the dynamics of the epidemic we are proposing herein aims to forecast the time and intensity of the epidemic peak (forward prediction), while allowing identifying the (more likely) beginning of the epidemic (backward prediction). In addition, we established a relationship between hospitalization in intensive care units (ICU) versus deaths daily rates by avoiding the necessity to rely on precise estimates of the infected fraction of the population The joint evolution of the above parameters over time allows for a trustworthy and unbiased estimation of the dynamics of the epidemic, allowing us to clearly detect the qualitatively different character of the ‘so-called’ second wave with respect to the previous epidemic peak. |
format | Online Article Text |
id | pubmed-7755893 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-77558932020-12-30 New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy Bizzarri, Mariano Di Traglia, Mario Giuliani, Alessandro Vestri, Annarita Fedeli, Valeria Prestininzi, Alberto Sci Rep Article COVID-19 pandemic in Italy displayed a spatial distribution that made the tracking of its time course quite difficult. The most relevant anomaly was the marked spatial heterogeneity of COVID-19 diffusion. Lombardia region accounted for around 60% of fatal cases (while hosting 15% of Italian population). Moreover, 86% of fatalities concentrated in four Northern Italy regions. The ‘explosive’ outbreak of COVID-19 in Lombardia at the very beginning of pandemic fatally biased the R-like statistics routinely used to control the disease dynamics. To (at least partially) overcome this bias, we propose a new index RI = dH/dI (daily derivative ratio of H and I, given H = Healed and I = Infected), corresponding to the ratio between healed and infected patients relative daily changes. The proposed index is less flawed than R by the uncertainty related to the estimated number of infected persons and allows to follow (and possibly forecast) epidemic dynamics in a largely model-independent way. To analyze the dynamics of the epidemic, starting from the beginning of the virus spreading—when data are insufficient to make an estimate by adopting SIR model—a "sigmoidal family with delay" logistic model was introduced. That approach allowed in estimating the epidemic peak using the few data gathered even before mid-March. Based on this analysis, the peak was correctly predicted to occur by end of April. Analytical methodology of the dynamics of the epidemic we are proposing herein aims to forecast the time and intensity of the epidemic peak (forward prediction), while allowing identifying the (more likely) beginning of the epidemic (backward prediction). In addition, we established a relationship between hospitalization in intensive care units (ICU) versus deaths daily rates by avoiding the necessity to rely on precise estimates of the infected fraction of the population The joint evolution of the above parameters over time allows for a trustworthy and unbiased estimation of the dynamics of the epidemic, allowing us to clearly detect the qualitatively different character of the ‘so-called’ second wave with respect to the previous epidemic peak. Nature Publishing Group UK 2020-12-22 /pmc/articles/PMC7755893/ /pubmed/33353964 http://dx.doi.org/10.1038/s41598-020-79039-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Bizzarri, Mariano Di Traglia, Mario Giuliani, Alessandro Vestri, Annarita Fedeli, Valeria Prestininzi, Alberto New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy |
title | New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy |
title_full | New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy |
title_fullStr | New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy |
title_full_unstemmed | New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy |
title_short | New statistical RI index allow to better track the dynamics of COVID-19 outbreak in Italy |
title_sort | new statistical ri index allow to better track the dynamics of covid-19 outbreak in italy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755893/ https://www.ncbi.nlm.nih.gov/pubmed/33353964 http://dx.doi.org/10.1038/s41598-020-79039-x |
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