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Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species

Salmonella is one of the most important infectious bacteria causing severe gastroenteritis and deaths in humans and animals, and the prompt diagnosis is crucial for effective control and treatment. The detection of Salmonella still depends principally on culture-based methods, which is time-consumin...

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Autores principales: Adebowale, Oluwawemimo, Good, Liam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756007/
https://www.ncbi.nlm.nih.gov/pubmed/33381652
http://dx.doi.org/10.1093/biomethods/bpaa024
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author Adebowale, Oluwawemimo
Good, Liam
author_facet Adebowale, Oluwawemimo
Good, Liam
author_sort Adebowale, Oluwawemimo
collection PubMed
description Salmonella is one of the most important infectious bacteria causing severe gastroenteritis and deaths in humans and animals, and the prompt diagnosis is crucial for effective control and treatment. The detection of Salmonella still depends principally on culture-based methods, which is time-consuming and laborious. Recently, polyhexamethylene biguanide (PHMB) was discovered to have cellular delivery properties and its combination with the fluorescence in situ hybridization (FISH) method was exploited for oligomer delivery and the rapid detection of Salmonella spps in this study. Cell-associated fluorescence was quantified using Volocity(®) 3-D image analysis software (Volocity 6.3, PerkinElmer, Inc.). PHMB complexed with fluorophore—labelled species-specific oligomers permeabilized freshly grown viable strains of Salmonella cells and mediated strong cell-associated fluorescence signals. This strategy further enabled a fixation-free protocol and hybridization in a single reaction. Using the modified FISH method, monoculture Salmonella strains were validated as well as detected in artificially contaminated water and milk within a turnaround period of 5 h. The method was observed to be comparable with the standard FISH technique (sFISH; P > 0.05). The findings suggest that fixation-free delivery and hybridization of oligomers using PHMB can provide a simplified and prompt strategy for Salmonella detection at the species level, and promote early management responses to the disease and appropriate antimicrobial therapy.
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spelling pubmed-77560072020-12-29 Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species Adebowale, Oluwawemimo Good, Liam Biol Methods Protoc Methods Manuscript Salmonella is one of the most important infectious bacteria causing severe gastroenteritis and deaths in humans and animals, and the prompt diagnosis is crucial for effective control and treatment. The detection of Salmonella still depends principally on culture-based methods, which is time-consuming and laborious. Recently, polyhexamethylene biguanide (PHMB) was discovered to have cellular delivery properties and its combination with the fluorescence in situ hybridization (FISH) method was exploited for oligomer delivery and the rapid detection of Salmonella spps in this study. Cell-associated fluorescence was quantified using Volocity(®) 3-D image analysis software (Volocity 6.3, PerkinElmer, Inc.). PHMB complexed with fluorophore—labelled species-specific oligomers permeabilized freshly grown viable strains of Salmonella cells and mediated strong cell-associated fluorescence signals. This strategy further enabled a fixation-free protocol and hybridization in a single reaction. Using the modified FISH method, monoculture Salmonella strains were validated as well as detected in artificially contaminated water and milk within a turnaround period of 5 h. The method was observed to be comparable with the standard FISH technique (sFISH; P > 0.05). The findings suggest that fixation-free delivery and hybridization of oligomers using PHMB can provide a simplified and prompt strategy for Salmonella detection at the species level, and promote early management responses to the disease and appropriate antimicrobial therapy. Oxford University Press 2020-12-16 /pmc/articles/PMC7756007/ /pubmed/33381652 http://dx.doi.org/10.1093/biomethods/bpaa024 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Methods Manuscript
Adebowale, Oluwawemimo
Good, Liam
Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species
title Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species
title_full Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species
title_fullStr Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species
title_full_unstemmed Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species
title_short Development of a fixation-free fluorescence in situ hybridization for the detection of Salmonella species
title_sort development of a fixation-free fluorescence in situ hybridization for the detection of salmonella species
topic Methods Manuscript
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756007/
https://www.ncbi.nlm.nih.gov/pubmed/33381652
http://dx.doi.org/10.1093/biomethods/bpaa024
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