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Cardiac Regeneration and Tumor Growth—What Do They Have in Common?

Acute myocardial infarction is a leading cause of death. Unlike most adult mammals, zebrafish have the capability to almost fully regenerate their hearts after injury. In contrast, ischemic damage in adult human and mouse hearts usually results in scar tissue. mRNA-Sequencing (Seq) and miRNA-Seq ana...

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Autores principales: Dicks, Severin, Jürgensen, Lonny, Leuschner, Florian, Hassel, David, Andrieux, Geoffroy, Boerries, Melanie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756072/
https://www.ncbi.nlm.nih.gov/pubmed/33362851
http://dx.doi.org/10.3389/fgene.2020.586658
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author Dicks, Severin
Jürgensen, Lonny
Leuschner, Florian
Hassel, David
Andrieux, Geoffroy
Boerries, Melanie
author_facet Dicks, Severin
Jürgensen, Lonny
Leuschner, Florian
Hassel, David
Andrieux, Geoffroy
Boerries, Melanie
author_sort Dicks, Severin
collection PubMed
description Acute myocardial infarction is a leading cause of death. Unlike most adult mammals, zebrafish have the capability to almost fully regenerate their hearts after injury. In contrast, ischemic damage in adult human and mouse hearts usually results in scar tissue. mRNA-Sequencing (Seq) and miRNA-Seq analyses of heart regeneration in zebrafish over time showed that the process can be divided into three phases: the first phase represents dedifferentiation and proliferation of cells, the second phase is characterized by migration, and in the third phase cell signals indicate heart development and differentiation. The first two phases seem to share major similarities with tumor development and growth. To gain more insight into these similarities between cardiac regeneration and tumor development and growth, we used patient matched tumor normal (“healthy”) RNA-Seq data for several tumor entities from The Cancer Genome Atlas (TCGA). Subsequently, RNA data were processed using the same pipeline for both the zebrafish samples and tumor datasets. Functional analysis showed that multiple Gene Ontology terms (GO terms) are involved in both early stage cardiac regeneration and tumor development/growth across multiple tumor entities. These GO terms are mostly associated with cell cycle processes. Further analysis showed that orthologous genes are the same key players that regulated these changes in both diseases. We also observed that GO terms associated with heart development in the third late phase of cardiac regeneration are downregulated in the tumor entities. Taken together, our analysis illustrates similarities between cardiac remodeling and tumor progression.
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spelling pubmed-77560722020-12-24 Cardiac Regeneration and Tumor Growth—What Do They Have in Common? Dicks, Severin Jürgensen, Lonny Leuschner, Florian Hassel, David Andrieux, Geoffroy Boerries, Melanie Front Genet Genetics Acute myocardial infarction is a leading cause of death. Unlike most adult mammals, zebrafish have the capability to almost fully regenerate their hearts after injury. In contrast, ischemic damage in adult human and mouse hearts usually results in scar tissue. mRNA-Sequencing (Seq) and miRNA-Seq analyses of heart regeneration in zebrafish over time showed that the process can be divided into three phases: the first phase represents dedifferentiation and proliferation of cells, the second phase is characterized by migration, and in the third phase cell signals indicate heart development and differentiation. The first two phases seem to share major similarities with tumor development and growth. To gain more insight into these similarities between cardiac regeneration and tumor development and growth, we used patient matched tumor normal (“healthy”) RNA-Seq data for several tumor entities from The Cancer Genome Atlas (TCGA). Subsequently, RNA data were processed using the same pipeline for both the zebrafish samples and tumor datasets. Functional analysis showed that multiple Gene Ontology terms (GO terms) are involved in both early stage cardiac regeneration and tumor development/growth across multiple tumor entities. These GO terms are mostly associated with cell cycle processes. Further analysis showed that orthologous genes are the same key players that regulated these changes in both diseases. We also observed that GO terms associated with heart development in the third late phase of cardiac regeneration are downregulated in the tumor entities. Taken together, our analysis illustrates similarities between cardiac remodeling and tumor progression. Frontiers Media S.A. 2020-12-09 /pmc/articles/PMC7756072/ /pubmed/33362851 http://dx.doi.org/10.3389/fgene.2020.586658 Text en Copyright © 2020 Dicks, Jürgensen, Leuschner, Hassel, Andrieux and Boerries. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Dicks, Severin
Jürgensen, Lonny
Leuschner, Florian
Hassel, David
Andrieux, Geoffroy
Boerries, Melanie
Cardiac Regeneration and Tumor Growth—What Do They Have in Common?
title Cardiac Regeneration and Tumor Growth—What Do They Have in Common?
title_full Cardiac Regeneration and Tumor Growth—What Do They Have in Common?
title_fullStr Cardiac Regeneration and Tumor Growth—What Do They Have in Common?
title_full_unstemmed Cardiac Regeneration and Tumor Growth—What Do They Have in Common?
title_short Cardiac Regeneration and Tumor Growth—What Do They Have in Common?
title_sort cardiac regeneration and tumor growth—what do they have in common?
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756072/
https://www.ncbi.nlm.nih.gov/pubmed/33362851
http://dx.doi.org/10.3389/fgene.2020.586658
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