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Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration

In an era of rapid global change, our ability to understand and predict Earth's natural systems is lagging behind our ability to monitor and measure changes in the biosphere. Bottlenecks to informing models with observations have reduced our capacity to fully exploit the growing volume and vari...

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Autores principales: Fer, Istem, Gardella, Anthony K., Shiklomanov, Alexey N., Campbell, Eleanor E., Cowdery, Elizabeth M., De Kauwe, Martin G., Desai, Ankur, Duveneck, Matthew J., Fisher, Joshua B., Haynes, Katherine D., Hoffman, Forrest M., Johnston, Miriam R., Kooper, Rob, LeBauer, David S., Mantooth, Joshua, Parton, William J., Poulter, Benjamin, Quaife, Tristan, Raiho, Ann, Schaefer, Kevin, Serbin, Shawn P., Simkins, James, Wilcox, Kevin R., Viskari, Toni, Dietze, Michael C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756391/
https://www.ncbi.nlm.nih.gov/pubmed/33075199
http://dx.doi.org/10.1111/gcb.15409
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author Fer, Istem
Gardella, Anthony K.
Shiklomanov, Alexey N.
Campbell, Eleanor E.
Cowdery, Elizabeth M.
De Kauwe, Martin G.
Desai, Ankur
Duveneck, Matthew J.
Fisher, Joshua B.
Haynes, Katherine D.
Hoffman, Forrest M.
Johnston, Miriam R.
Kooper, Rob
LeBauer, David S.
Mantooth, Joshua
Parton, William J.
Poulter, Benjamin
Quaife, Tristan
Raiho, Ann
Schaefer, Kevin
Serbin, Shawn P.
Simkins, James
Wilcox, Kevin R.
Viskari, Toni
Dietze, Michael C.
author_facet Fer, Istem
Gardella, Anthony K.
Shiklomanov, Alexey N.
Campbell, Eleanor E.
Cowdery, Elizabeth M.
De Kauwe, Martin G.
Desai, Ankur
Duveneck, Matthew J.
Fisher, Joshua B.
Haynes, Katherine D.
Hoffman, Forrest M.
Johnston, Miriam R.
Kooper, Rob
LeBauer, David S.
Mantooth, Joshua
Parton, William J.
Poulter, Benjamin
Quaife, Tristan
Raiho, Ann
Schaefer, Kevin
Serbin, Shawn P.
Simkins, James
Wilcox, Kevin R.
Viskari, Toni
Dietze, Michael C.
author_sort Fer, Istem
collection PubMed
description In an era of rapid global change, our ability to understand and predict Earth's natural systems is lagging behind our ability to monitor and measure changes in the biosphere. Bottlenecks to informing models with observations have reduced our capacity to fully exploit the growing volume and variety of available data. Here, we take a critical look at the information infrastructure that connects ecosystem modeling and measurement efforts, and propose a roadmap to community cyberinfrastructure development that can reduce the divisions between empirical research and modeling and accelerate the pace of discovery. A new era of data‐model integration requires investment in accessible, scalable, and transparent tools that integrate the expertise of the whole community, including both modelers and empiricists. This roadmap focuses on five key opportunities for community tools: the underlying foundations of community cyberinfrastructure; data ingest; calibration of models to data; model‐data benchmarking; and data assimilation and ecological forecasting. This community‐driven approach is a key to meeting the pressing needs of science and society in the 21st century.
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spelling pubmed-77563912020-12-28 Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration Fer, Istem Gardella, Anthony K. Shiklomanov, Alexey N. Campbell, Eleanor E. Cowdery, Elizabeth M. De Kauwe, Martin G. Desai, Ankur Duveneck, Matthew J. Fisher, Joshua B. Haynes, Katherine D. Hoffman, Forrest M. Johnston, Miriam R. Kooper, Rob LeBauer, David S. Mantooth, Joshua Parton, William J. Poulter, Benjamin Quaife, Tristan Raiho, Ann Schaefer, Kevin Serbin, Shawn P. Simkins, James Wilcox, Kevin R. Viskari, Toni Dietze, Michael C. Glob Chang Biol Opinion In an era of rapid global change, our ability to understand and predict Earth's natural systems is lagging behind our ability to monitor and measure changes in the biosphere. Bottlenecks to informing models with observations have reduced our capacity to fully exploit the growing volume and variety of available data. Here, we take a critical look at the information infrastructure that connects ecosystem modeling and measurement efforts, and propose a roadmap to community cyberinfrastructure development that can reduce the divisions between empirical research and modeling and accelerate the pace of discovery. A new era of data‐model integration requires investment in accessible, scalable, and transparent tools that integrate the expertise of the whole community, including both modelers and empiricists. This roadmap focuses on five key opportunities for community tools: the underlying foundations of community cyberinfrastructure; data ingest; calibration of models to data; model‐data benchmarking; and data assimilation and ecological forecasting. This community‐driven approach is a key to meeting the pressing needs of science and society in the 21st century. John Wiley and Sons Inc. 2020-11-06 2021-01 /pmc/articles/PMC7756391/ /pubmed/33075199 http://dx.doi.org/10.1111/gcb.15409 Text en © 2020 The Authors. Global Change Biology published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Opinion
Fer, Istem
Gardella, Anthony K.
Shiklomanov, Alexey N.
Campbell, Eleanor E.
Cowdery, Elizabeth M.
De Kauwe, Martin G.
Desai, Ankur
Duveneck, Matthew J.
Fisher, Joshua B.
Haynes, Katherine D.
Hoffman, Forrest M.
Johnston, Miriam R.
Kooper, Rob
LeBauer, David S.
Mantooth, Joshua
Parton, William J.
Poulter, Benjamin
Quaife, Tristan
Raiho, Ann
Schaefer, Kevin
Serbin, Shawn P.
Simkins, James
Wilcox, Kevin R.
Viskari, Toni
Dietze, Michael C.
Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration
title Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration
title_full Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration
title_fullStr Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration
title_full_unstemmed Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration
title_short Beyond ecosystem modeling: A roadmap to community cyberinfrastructure for ecological data‐model integration
title_sort beyond ecosystem modeling: a roadmap to community cyberinfrastructure for ecological data‐model integration
topic Opinion
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756391/
https://www.ncbi.nlm.nih.gov/pubmed/33075199
http://dx.doi.org/10.1111/gcb.15409
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