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An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives

In the last decades, it has become clear that the canonical amino acid repertoire codified by the universal genetic code is not up to the needs of emerging biotechnologies. For this reason, extensive genetic code re‐engineering is essential to expand the scope of ribosomal protein translation, leadi...

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Autores principales: Schipp, Christian Johannes, Ma, Ying, Al‐Shameri, Ammar, D'Alessio, Federico, Neubauer, Peter, Contestabile, Roberto, Budisa, Nediljko, di Salvo, Martino Luigi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756864/
https://www.ncbi.nlm.nih.gov/pubmed/32734669
http://dx.doi.org/10.1002/cbic.202000257
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author Schipp, Christian Johannes
Ma, Ying
Al‐Shameri, Ammar
D'Alessio, Federico
Neubauer, Peter
Contestabile, Roberto
Budisa, Nediljko
di Salvo, Martino Luigi
author_facet Schipp, Christian Johannes
Ma, Ying
Al‐Shameri, Ammar
D'Alessio, Federico
Neubauer, Peter
Contestabile, Roberto
Budisa, Nediljko
di Salvo, Martino Luigi
author_sort Schipp, Christian Johannes
collection PubMed
description In the last decades, it has become clear that the canonical amino acid repertoire codified by the universal genetic code is not up to the needs of emerging biotechnologies. For this reason, extensive genetic code re‐engineering is essential to expand the scope of ribosomal protein translation, leading to reprogrammed microbial cells equipped with an alternative biochemical alphabet to be exploited as potential factories for biotechnological purposes. The prerequisite for this to happen is a continuous intracellular supply of noncanonical amino acids through synthetic metabolism from simple and cheap precursors. We have engineered an Escherichia coli bacterial system that fulfills these requirements through reconfiguration of the methionine biosynthetic pathway and the introduction of an exogenous direct trans‐sulfuration pathway. Our metabolic scheme operates in vivo, rescuing intermediates from core cell metabolism and combining them with small bio‐orthogonal compounds. Our reprogrammed E. coli strain is capable of the in‐cell production of l‐azidohomoalanine, which is directly incorporated into proteins in response to methionine codons. We thereby constructed a prototype suitable for economic, versatile, green sustainable chemistry, pushing towards enzyme chemistry and biotechnology‐based production.
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spelling pubmed-77568642020-12-28 An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives Schipp, Christian Johannes Ma, Ying Al‐Shameri, Ammar D'Alessio, Federico Neubauer, Peter Contestabile, Roberto Budisa, Nediljko di Salvo, Martino Luigi Chembiochem Full Papers In the last decades, it has become clear that the canonical amino acid repertoire codified by the universal genetic code is not up to the needs of emerging biotechnologies. For this reason, extensive genetic code re‐engineering is essential to expand the scope of ribosomal protein translation, leading to reprogrammed microbial cells equipped with an alternative biochemical alphabet to be exploited as potential factories for biotechnological purposes. The prerequisite for this to happen is a continuous intracellular supply of noncanonical amino acids through synthetic metabolism from simple and cheap precursors. We have engineered an Escherichia coli bacterial system that fulfills these requirements through reconfiguration of the methionine biosynthetic pathway and the introduction of an exogenous direct trans‐sulfuration pathway. Our metabolic scheme operates in vivo, rescuing intermediates from core cell metabolism and combining them with small bio‐orthogonal compounds. Our reprogrammed E. coli strain is capable of the in‐cell production of l‐azidohomoalanine, which is directly incorporated into proteins in response to methionine codons. We thereby constructed a prototype suitable for economic, versatile, green sustainable chemistry, pushing towards enzyme chemistry and biotechnology‐based production. John Wiley and Sons Inc. 2020-10-13 2020-12-11 /pmc/articles/PMC7756864/ /pubmed/32734669 http://dx.doi.org/10.1002/cbic.202000257 Text en © 2020 The Authors. Published by Wiley-VCH GmbH This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Schipp, Christian Johannes
Ma, Ying
Al‐Shameri, Ammar
D'Alessio, Federico
Neubauer, Peter
Contestabile, Roberto
Budisa, Nediljko
di Salvo, Martino Luigi
An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives
title An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives
title_full An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives
title_fullStr An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives
title_full_unstemmed An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives
title_short An Engineered Escherichia coli Strain with Synthetic Metabolism for in‐Cell Production of Translationally Active Methionine Derivatives
title_sort engineered escherichia coli strain with synthetic metabolism for in‐cell production of translationally active methionine derivatives
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7756864/
https://www.ncbi.nlm.nih.gov/pubmed/32734669
http://dx.doi.org/10.1002/cbic.202000257
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