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Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma

Lung adenocarcinoma (LUAD) is the predominant subtype of lung cancer with a relatively poor prognosis. The dramatic improvements of new immunotherapy strategies have shown promising results in lung cancer patients. This study aimed to elucidate the functions of immune-associated genes in LUAD progno...

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Autores principales: Aizemaiti, Rusidanmu, Wu, Zhigang, Tang, Jie, Yan, Haimeng, Lv, Xiayi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7757139/
https://www.ncbi.nlm.nih.gov/pubmed/33390814
http://dx.doi.org/10.7150/ijms.51297
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author Aizemaiti, Rusidanmu
Wu, Zhigang
Tang, Jie
Yan, Haimeng
Lv, Xiayi
author_facet Aizemaiti, Rusidanmu
Wu, Zhigang
Tang, Jie
Yan, Haimeng
Lv, Xiayi
author_sort Aizemaiti, Rusidanmu
collection PubMed
description Lung adenocarcinoma (LUAD) is the predominant subtype of lung cancer with a relatively poor prognosis. The dramatic improvements of new immunotherapy strategies have shown promising results in lung cancer patients. This study aimed to elucidate the functions of immune-associated genes in LUAD prognosis and pathogenesis by analyzing public databases. We obtained expression profiles of LUAD patients from The Cancer Genome Atlas (TCGA) database and applied the ESTIMATE algorithm to calculate immune scores and stromal scores. A series of microenvironment-related genes with prognostic value was then identified. Of note, heat shock factor 5 (HSF5) was found to be decreased in LUAD patients and positively correlated with overall survival, which was further confirmed in the Gene Expression Omnibus (GEO) database. Moreover, Gene Ontology (GO) analysis based on the correlated genes of HSF5 demonstrated that HSF5 expression was significantly associated with the immune response and inflammatory activities. Based on the Tumor IMmune Estimation Resource (TIMER) and Gene Expression Profiling Interactive Analysis (GEPIA) datasets, HSF5 expression showed strong correlations with various immune cell infiltration and diverse immune marker sets. These findings suggest that HSF5 can be used as a promising biomarker for determining prognosis and immune infiltration in LUAD patients.
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spelling pubmed-77571392021-01-01 Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma Aizemaiti, Rusidanmu Wu, Zhigang Tang, Jie Yan, Haimeng Lv, Xiayi Int J Med Sci Research Paper Lung adenocarcinoma (LUAD) is the predominant subtype of lung cancer with a relatively poor prognosis. The dramatic improvements of new immunotherapy strategies have shown promising results in lung cancer patients. This study aimed to elucidate the functions of immune-associated genes in LUAD prognosis and pathogenesis by analyzing public databases. We obtained expression profiles of LUAD patients from The Cancer Genome Atlas (TCGA) database and applied the ESTIMATE algorithm to calculate immune scores and stromal scores. A series of microenvironment-related genes with prognostic value was then identified. Of note, heat shock factor 5 (HSF5) was found to be decreased in LUAD patients and positively correlated with overall survival, which was further confirmed in the Gene Expression Omnibus (GEO) database. Moreover, Gene Ontology (GO) analysis based on the correlated genes of HSF5 demonstrated that HSF5 expression was significantly associated with the immune response and inflammatory activities. Based on the Tumor IMmune Estimation Resource (TIMER) and Gene Expression Profiling Interactive Analysis (GEPIA) datasets, HSF5 expression showed strong correlations with various immune cell infiltration and diverse immune marker sets. These findings suggest that HSF5 can be used as a promising biomarker for determining prognosis and immune infiltration in LUAD patients. Ivyspring International Publisher 2021-01-01 /pmc/articles/PMC7757139/ /pubmed/33390814 http://dx.doi.org/10.7150/ijms.51297 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Aizemaiti, Rusidanmu
Wu, Zhigang
Tang, Jie
Yan, Haimeng
Lv, Xiayi
Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
title Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
title_full Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
title_fullStr Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
title_full_unstemmed Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
title_short Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
title_sort heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7757139/
https://www.ncbi.nlm.nih.gov/pubmed/33390814
http://dx.doi.org/10.7150/ijms.51297
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