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Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma
Lung adenocarcinoma (LUAD) is the predominant subtype of lung cancer with a relatively poor prognosis. The dramatic improvements of new immunotherapy strategies have shown promising results in lung cancer patients. This study aimed to elucidate the functions of immune-associated genes in LUAD progno...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7757139/ https://www.ncbi.nlm.nih.gov/pubmed/33390814 http://dx.doi.org/10.7150/ijms.51297 |
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author | Aizemaiti, Rusidanmu Wu, Zhigang Tang, Jie Yan, Haimeng Lv, Xiayi |
author_facet | Aizemaiti, Rusidanmu Wu, Zhigang Tang, Jie Yan, Haimeng Lv, Xiayi |
author_sort | Aizemaiti, Rusidanmu |
collection | PubMed |
description | Lung adenocarcinoma (LUAD) is the predominant subtype of lung cancer with a relatively poor prognosis. The dramatic improvements of new immunotherapy strategies have shown promising results in lung cancer patients. This study aimed to elucidate the functions of immune-associated genes in LUAD prognosis and pathogenesis by analyzing public databases. We obtained expression profiles of LUAD patients from The Cancer Genome Atlas (TCGA) database and applied the ESTIMATE algorithm to calculate immune scores and stromal scores. A series of microenvironment-related genes with prognostic value was then identified. Of note, heat shock factor 5 (HSF5) was found to be decreased in LUAD patients and positively correlated with overall survival, which was further confirmed in the Gene Expression Omnibus (GEO) database. Moreover, Gene Ontology (GO) analysis based on the correlated genes of HSF5 demonstrated that HSF5 expression was significantly associated with the immune response and inflammatory activities. Based on the Tumor IMmune Estimation Resource (TIMER) and Gene Expression Profiling Interactive Analysis (GEPIA) datasets, HSF5 expression showed strong correlations with various immune cell infiltration and diverse immune marker sets. These findings suggest that HSF5 can be used as a promising biomarker for determining prognosis and immune infiltration in LUAD patients. |
format | Online Article Text |
id | pubmed-7757139 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-77571392021-01-01 Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma Aizemaiti, Rusidanmu Wu, Zhigang Tang, Jie Yan, Haimeng Lv, Xiayi Int J Med Sci Research Paper Lung adenocarcinoma (LUAD) is the predominant subtype of lung cancer with a relatively poor prognosis. The dramatic improvements of new immunotherapy strategies have shown promising results in lung cancer patients. This study aimed to elucidate the functions of immune-associated genes in LUAD prognosis and pathogenesis by analyzing public databases. We obtained expression profiles of LUAD patients from The Cancer Genome Atlas (TCGA) database and applied the ESTIMATE algorithm to calculate immune scores and stromal scores. A series of microenvironment-related genes with prognostic value was then identified. Of note, heat shock factor 5 (HSF5) was found to be decreased in LUAD patients and positively correlated with overall survival, which was further confirmed in the Gene Expression Omnibus (GEO) database. Moreover, Gene Ontology (GO) analysis based on the correlated genes of HSF5 demonstrated that HSF5 expression was significantly associated with the immune response and inflammatory activities. Based on the Tumor IMmune Estimation Resource (TIMER) and Gene Expression Profiling Interactive Analysis (GEPIA) datasets, HSF5 expression showed strong correlations with various immune cell infiltration and diverse immune marker sets. These findings suggest that HSF5 can be used as a promising biomarker for determining prognosis and immune infiltration in LUAD patients. Ivyspring International Publisher 2021-01-01 /pmc/articles/PMC7757139/ /pubmed/33390814 http://dx.doi.org/10.7150/ijms.51297 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Aizemaiti, Rusidanmu Wu, Zhigang Tang, Jie Yan, Haimeng Lv, Xiayi Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
title | Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
title_full | Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
title_fullStr | Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
title_full_unstemmed | Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
title_short | Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
title_sort | heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7757139/ https://www.ncbi.nlm.nih.gov/pubmed/33390814 http://dx.doi.org/10.7150/ijms.51297 |
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