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The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The c...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759241/ https://www.ncbi.nlm.nih.gov/pubmed/33426282 http://dx.doi.org/10.1080/23802359.2020.1840929 |
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author | Li, Chu-Ran Luo, Yan Zhao, Ping Li, Lu |
author_facet | Li, Chu-Ran Luo, Yan Zhao, Ping Li, Lu |
author_sort | Li, Chu-Ran |
collection | PubMed |
description | Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The cp genome was 160,114 bp in length with four typical quadripartite structures, which was consisted of a large single copy (LSC) region of 87,756 bp, a small single copy (SSC) region of 18,872 bp, and two inverted repeats (IR) of 26,734 bp. In addition, the cp genome encoded 132 genes in total, of which were 113 unique genes, including 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The phylogenetic analysis indicated that P. articulata was closely clustered with other two species of Pholidota and that they appeared to be related to Pleione in Arethuseae Lindl. |
format | Online Article Text |
id | pubmed-7759241 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77592412021-01-08 The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid Li, Chu-Ran Luo, Yan Zhao, Ping Li, Lu Mitochondrial DNA B Resour Mitogenome Announcement Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The cp genome was 160,114 bp in length with four typical quadripartite structures, which was consisted of a large single copy (LSC) region of 87,756 bp, a small single copy (SSC) region of 18,872 bp, and two inverted repeats (IR) of 26,734 bp. In addition, the cp genome encoded 132 genes in total, of which were 113 unique genes, including 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The phylogenetic analysis indicated that P. articulata was closely clustered with other two species of Pholidota and that they appeared to be related to Pleione in Arethuseae Lindl. Taylor & Francis 2020-12-24 /pmc/articles/PMC7759241/ /pubmed/33426282 http://dx.doi.org/10.1080/23802359.2020.1840929 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Chu-Ran Luo, Yan Zhao, Ping Li, Lu The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
title | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
title_full | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
title_fullStr | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
title_full_unstemmed | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
title_short | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
title_sort | complete chloroplast genome sequence of pholidota articulata (orchidaceae), a rarely medicinal orchid |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759241/ https://www.ncbi.nlm.nih.gov/pubmed/33426282 http://dx.doi.org/10.1080/23802359.2020.1840929 |
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