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The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid

Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The c...

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Autores principales: Li, Chu-Ran, Luo, Yan, Zhao, Ping, Li, Lu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759241/
https://www.ncbi.nlm.nih.gov/pubmed/33426282
http://dx.doi.org/10.1080/23802359.2020.1840929
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author Li, Chu-Ran
Luo, Yan
Zhao, Ping
Li, Lu
author_facet Li, Chu-Ran
Luo, Yan
Zhao, Ping
Li, Lu
author_sort Li, Chu-Ran
collection PubMed
description Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The cp genome was 160,114 bp in length with four typical quadripartite structures, which was consisted of a large single copy (LSC) region of 87,756 bp, a small single copy (SSC) region of 18,872 bp, and two inverted repeats (IR) of 26,734 bp. In addition, the cp genome encoded 132 genes in total, of which were 113 unique genes, including 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The phylogenetic analysis indicated that P. articulata was closely clustered with other two species of Pholidota and that they appeared to be related to Pleione in Arethuseae Lindl.
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spelling pubmed-77592412021-01-08 The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid Li, Chu-Ran Luo, Yan Zhao, Ping Li, Lu Mitochondrial DNA B Resour Mitogenome Announcement Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The cp genome was 160,114 bp in length with four typical quadripartite structures, which was consisted of a large single copy (LSC) region of 87,756 bp, a small single copy (SSC) region of 18,872 bp, and two inverted repeats (IR) of 26,734 bp. In addition, the cp genome encoded 132 genes in total, of which were 113 unique genes, including 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The phylogenetic analysis indicated that P. articulata was closely clustered with other two species of Pholidota and that they appeared to be related to Pleione in Arethuseae Lindl. Taylor & Francis 2020-12-24 /pmc/articles/PMC7759241/ /pubmed/33426282 http://dx.doi.org/10.1080/23802359.2020.1840929 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Chu-Ran
Luo, Yan
Zhao, Ping
Li, Lu
The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
title The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
title_full The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
title_fullStr The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
title_full_unstemmed The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
title_short The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
title_sort complete chloroplast genome sequence of pholidota articulata (orchidaceae), a rarely medicinal orchid
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759241/
https://www.ncbi.nlm.nih.gov/pubmed/33426282
http://dx.doi.org/10.1080/23802359.2020.1840929
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