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The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China

Catalpa bungei is an important resource of timber, belonging to the genus catalpa (Bignoniaceae). In this study, we sequenced complete chloroplast (cp) genome of C. bungei, using a NovaSeq 6000 sequencing platform. The genome of the C. bungei was 152,153 bp in length, including a large single-copy r...

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Autores principales: Yang, Jing, Wang, Shuai, Huang, Ziqi, Guo, Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759281/
https://www.ncbi.nlm.nih.gov/pubmed/33426301
http://dx.doi.org/10.1080/23802359.2020.1841581
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author Yang, Jing
Wang, Shuai
Huang, Ziqi
Guo, Peng
author_facet Yang, Jing
Wang, Shuai
Huang, Ziqi
Guo, Peng
author_sort Yang, Jing
collection PubMed
description Catalpa bungei is an important resource of timber, belonging to the genus catalpa (Bignoniaceae). In this study, we sequenced complete chloroplast (cp) genome of C. bungei, using a NovaSeq 6000 sequencing platform. The genome of the C. bungei was 152,153 bp in length, including a large single-copy region (84,910 bp), a small single-copy region (12,664 bp), and two inverted repeats regions (30,285 bp). It encodes 126 genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analyses were performed based on 15 cp genomes using the maximum likelihood (ML) method, supported that C. bungei was probably more closely related to C. speciosa. This study, the cp genome of C. bungei was assembled, which will provide more theoretical basis for determine the phylogenetic relationships of the Catalpa and related species.
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spelling pubmed-77592812021-01-08 The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China Yang, Jing Wang, Shuai Huang, Ziqi Guo, Peng Mitochondrial DNA B Resour Mitogenome Announcement Catalpa bungei is an important resource of timber, belonging to the genus catalpa (Bignoniaceae). In this study, we sequenced complete chloroplast (cp) genome of C. bungei, using a NovaSeq 6000 sequencing platform. The genome of the C. bungei was 152,153 bp in length, including a large single-copy region (84,910 bp), a small single-copy region (12,664 bp), and two inverted repeats regions (30,285 bp). It encodes 126 genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analyses were performed based on 15 cp genomes using the maximum likelihood (ML) method, supported that C. bungei was probably more closely related to C. speciosa. This study, the cp genome of C. bungei was assembled, which will provide more theoretical basis for determine the phylogenetic relationships of the Catalpa and related species. Taylor & Francis 2020-12-24 /pmc/articles/PMC7759281/ /pubmed/33426301 http://dx.doi.org/10.1080/23802359.2020.1841581 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Jing
Wang, Shuai
Huang, Ziqi
Guo, Peng
The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
title The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
title_full The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
title_fullStr The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
title_full_unstemmed The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
title_short The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
title_sort complete chloroplast genome sequence of catalpa bungei (bignoniaceae): a high-quality timber species from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759281/
https://www.ncbi.nlm.nih.gov/pubmed/33426301
http://dx.doi.org/10.1080/23802359.2020.1841581
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