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The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China
Catalpa bungei is an important resource of timber, belonging to the genus catalpa (Bignoniaceae). In this study, we sequenced complete chloroplast (cp) genome of C. bungei, using a NovaSeq 6000 sequencing platform. The genome of the C. bungei was 152,153 bp in length, including a large single-copy r...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759281/ https://www.ncbi.nlm.nih.gov/pubmed/33426301 http://dx.doi.org/10.1080/23802359.2020.1841581 |
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author | Yang, Jing Wang, Shuai Huang, Ziqi Guo, Peng |
author_facet | Yang, Jing Wang, Shuai Huang, Ziqi Guo, Peng |
author_sort | Yang, Jing |
collection | PubMed |
description | Catalpa bungei is an important resource of timber, belonging to the genus catalpa (Bignoniaceae). In this study, we sequenced complete chloroplast (cp) genome of C. bungei, using a NovaSeq 6000 sequencing platform. The genome of the C. bungei was 152,153 bp in length, including a large single-copy region (84,910 bp), a small single-copy region (12,664 bp), and two inverted repeats regions (30,285 bp). It encodes 126 genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analyses were performed based on 15 cp genomes using the maximum likelihood (ML) method, supported that C. bungei was probably more closely related to C. speciosa. This study, the cp genome of C. bungei was assembled, which will provide more theoretical basis for determine the phylogenetic relationships of the Catalpa and related species. |
format | Online Article Text |
id | pubmed-7759281 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77592812021-01-08 The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China Yang, Jing Wang, Shuai Huang, Ziqi Guo, Peng Mitochondrial DNA B Resour Mitogenome Announcement Catalpa bungei is an important resource of timber, belonging to the genus catalpa (Bignoniaceae). In this study, we sequenced complete chloroplast (cp) genome of C. bungei, using a NovaSeq 6000 sequencing platform. The genome of the C. bungei was 152,153 bp in length, including a large single-copy region (84,910 bp), a small single-copy region (12,664 bp), and two inverted repeats regions (30,285 bp). It encodes 126 genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analyses were performed based on 15 cp genomes using the maximum likelihood (ML) method, supported that C. bungei was probably more closely related to C. speciosa. This study, the cp genome of C. bungei was assembled, which will provide more theoretical basis for determine the phylogenetic relationships of the Catalpa and related species. Taylor & Francis 2020-12-24 /pmc/articles/PMC7759281/ /pubmed/33426301 http://dx.doi.org/10.1080/23802359.2020.1841581 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Yang, Jing Wang, Shuai Huang, Ziqi Guo, Peng The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China |
title | The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China |
title_full | The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China |
title_fullStr | The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China |
title_full_unstemmed | The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China |
title_short | The complete chloroplast genome sequence of Catalpa bungei (Bignoniaceae): a high-quality timber species from China |
title_sort | complete chloroplast genome sequence of catalpa bungei (bignoniaceae): a high-quality timber species from china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759281/ https://www.ncbi.nlm.nih.gov/pubmed/33426301 http://dx.doi.org/10.1080/23802359.2020.1841581 |
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