Cargando…

Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot

Albanian taxa and populations of the genus Odontarrhena are most promising candidates for research on metal tolerance and Ni-agromining, but their genetic structure remains unknown. We investigated phylogenetic relationships and genetic differentiation in relation to distribution and ploidy of the t...

Descripción completa

Detalles Bibliográficos
Autores principales: Coppi, Andrea, Baker, Alan J. M., Bettarini, Isabella, Colzi, Ilaria, Echevarria, Guillaume, Pazzagli, Luigia, Gonnelli, Cristina, Selvi, Federico
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759883/
https://www.ncbi.nlm.nih.gov/pubmed/33271845
http://dx.doi.org/10.3390/plants9121686
_version_ 1783627202043052032
author Coppi, Andrea
Baker, Alan J. M.
Bettarini, Isabella
Colzi, Ilaria
Echevarria, Guillaume
Pazzagli, Luigia
Gonnelli, Cristina
Selvi, Federico
author_facet Coppi, Andrea
Baker, Alan J. M.
Bettarini, Isabella
Colzi, Ilaria
Echevarria, Guillaume
Pazzagli, Luigia
Gonnelli, Cristina
Selvi, Federico
author_sort Coppi, Andrea
collection PubMed
description Albanian taxa and populations of the genus Odontarrhena are most promising candidates for research on metal tolerance and Ni-agromining, but their genetic structure remains unknown. We investigated phylogenetic relationships and genetic differentiation in relation to distribution and ploidy of the taxa, anthropic site disturbance, elevation, soil type, and trace metals at each population site. After performing DNA sequencing of selected accessions, we applied DNA-fingerprinting to analyze the genetic structure of 32 populations from ultramafic and non-ultramafic outcrops across Albania. Low sequence divergence resulted in poorly resolved phylograms, but supported affinity between the two diploid serpentine endemics O. moravensis and O. rigida. Analysis of molecular variance (AMOVA) revealed significant population differentiation, but no isolation by distance. Among-population variation was higher in polyploids than in diploids, in which genetic distances were lower. Genetic admixing at population and individual level occurred especially in the polyploids O. chalcidica, O. decipiens, and O. smolikana. Admixing increased with site disturbance. Outlier loci were higher in serpentine populations but decreased along altitude with lower drought and heat stress. Genetic variability gained by gene flow and hybridization at contact zones with “resident” species of primary ultramafic habitats promoted expansion of the tetraploid O. chalcidica across anthropogenic sites.
format Online
Article
Text
id pubmed-7759883
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-77598832020-12-26 Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot Coppi, Andrea Baker, Alan J. M. Bettarini, Isabella Colzi, Ilaria Echevarria, Guillaume Pazzagli, Luigia Gonnelli, Cristina Selvi, Federico Plants (Basel) Article Albanian taxa and populations of the genus Odontarrhena are most promising candidates for research on metal tolerance and Ni-agromining, but their genetic structure remains unknown. We investigated phylogenetic relationships and genetic differentiation in relation to distribution and ploidy of the taxa, anthropic site disturbance, elevation, soil type, and trace metals at each population site. After performing DNA sequencing of selected accessions, we applied DNA-fingerprinting to analyze the genetic structure of 32 populations from ultramafic and non-ultramafic outcrops across Albania. Low sequence divergence resulted in poorly resolved phylograms, but supported affinity between the two diploid serpentine endemics O. moravensis and O. rigida. Analysis of molecular variance (AMOVA) revealed significant population differentiation, but no isolation by distance. Among-population variation was higher in polyploids than in diploids, in which genetic distances were lower. Genetic admixing at population and individual level occurred especially in the polyploids O. chalcidica, O. decipiens, and O. smolikana. Admixing increased with site disturbance. Outlier loci were higher in serpentine populations but decreased along altitude with lower drought and heat stress. Genetic variability gained by gene flow and hybridization at contact zones with “resident” species of primary ultramafic habitats promoted expansion of the tetraploid O. chalcidica across anthropogenic sites. MDPI 2020-12-01 /pmc/articles/PMC7759883/ /pubmed/33271845 http://dx.doi.org/10.3390/plants9121686 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Coppi, Andrea
Baker, Alan J. M.
Bettarini, Isabella
Colzi, Ilaria
Echevarria, Guillaume
Pazzagli, Luigia
Gonnelli, Cristina
Selvi, Federico
Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot
title Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot
title_full Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot
title_fullStr Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot
title_full_unstemmed Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot
title_short Population Genetics of Odontarrhena (Brassicaceae) from Albania: The Effects of Anthropic Habitat Disturbance, Soil, and Altitude on a Ni-Hyperaccumulator Plant Group from a Major Serpentine Hotspot
title_sort population genetics of odontarrhena (brassicaceae) from albania: the effects of anthropic habitat disturbance, soil, and altitude on a ni-hyperaccumulator plant group from a major serpentine hotspot
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759883/
https://www.ncbi.nlm.nih.gov/pubmed/33271845
http://dx.doi.org/10.3390/plants9121686
work_keys_str_mv AT coppiandrea populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT bakeralanjm populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT bettariniisabella populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT colziilaria populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT echevarriaguillaume populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT pazzagliluigia populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT gonnellicristina populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot
AT selvifederico populationgeneticsofodontarrhenabrassicaceaefromalbaniatheeffectsofanthropichabitatdisturbancesoilandaltitudeonanihyperaccumulatorplantgroupfromamajorserpentinehotspot