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Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease

Familial Meniere Disease (FMD) is a rare inner ear disorder characterized by episodic vertigo associated with sensorineural hearing loss, tinnitus and/or aural fullness. We conducted a systematic review to find sequencing studies segregating rare variants in FMD to obtain evidence to support candida...

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Detalles Bibliográficos
Autores principales: Escalera-Balsera, Alba, Roman-Naranjo, Pablo, Lopez-Escamez, Jose Antonio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7761472/
https://www.ncbi.nlm.nih.gov/pubmed/33260921
http://dx.doi.org/10.3390/genes11121414
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author Escalera-Balsera, Alba
Roman-Naranjo, Pablo
Lopez-Escamez, Jose Antonio
author_facet Escalera-Balsera, Alba
Roman-Naranjo, Pablo
Lopez-Escamez, Jose Antonio
author_sort Escalera-Balsera, Alba
collection PubMed
description Familial Meniere Disease (FMD) is a rare inner ear disorder characterized by episodic vertigo associated with sensorineural hearing loss, tinnitus and/or aural fullness. We conducted a systematic review to find sequencing studies segregating rare variants in FMD to obtain evidence to support candidate genes for MD. After evaluating the quality of the retrieved records, eight studies were selected to carry out a quantitative synthesis. These articles described 20 single nucleotide variants (SNVs) in 11 genes (FAM136A, DTNA, PRKCB, COCH, DPT, SEMA3D, STRC, HMX2, TMEM55B, OTOG and LSAMP), most of them in singular families—the exception being the OTOG gene. Furthermore, we analyzed the pathogenicity of each SNV and compared its allelic frequency with reference datasets to evaluate its role in the pathogenesis of FMD. By retrieving gene expression data in these genes from different databases, we could classify them according to their gene expression in neural or inner ear tissues. Finally, we evaluated the pattern of inheritance to conclude which genes show an autosomal dominant (AD) or autosomal recessive (AR) inheritance in FMD.
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spelling pubmed-77614722020-12-26 Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease Escalera-Balsera, Alba Roman-Naranjo, Pablo Lopez-Escamez, Jose Antonio Genes (Basel) Review Familial Meniere Disease (FMD) is a rare inner ear disorder characterized by episodic vertigo associated with sensorineural hearing loss, tinnitus and/or aural fullness. We conducted a systematic review to find sequencing studies segregating rare variants in FMD to obtain evidence to support candidate genes for MD. After evaluating the quality of the retrieved records, eight studies were selected to carry out a quantitative synthesis. These articles described 20 single nucleotide variants (SNVs) in 11 genes (FAM136A, DTNA, PRKCB, COCH, DPT, SEMA3D, STRC, HMX2, TMEM55B, OTOG and LSAMP), most of them in singular families—the exception being the OTOG gene. Furthermore, we analyzed the pathogenicity of each SNV and compared its allelic frequency with reference datasets to evaluate its role in the pathogenesis of FMD. By retrieving gene expression data in these genes from different databases, we could classify them according to their gene expression in neural or inner ear tissues. Finally, we evaluated the pattern of inheritance to conclude which genes show an autosomal dominant (AD) or autosomal recessive (AR) inheritance in FMD. MDPI 2020-11-27 /pmc/articles/PMC7761472/ /pubmed/33260921 http://dx.doi.org/10.3390/genes11121414 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Escalera-Balsera, Alba
Roman-Naranjo, Pablo
Lopez-Escamez, Jose Antonio
Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease
title Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease
title_full Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease
title_fullStr Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease
title_full_unstemmed Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease
title_short Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease
title_sort systematic review of sequencing studies and gene expression profiling in familial meniere disease
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7761472/
https://www.ncbi.nlm.nih.gov/pubmed/33260921
http://dx.doi.org/10.3390/genes11121414
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