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Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea

Tricyclic wyosine derivatives are present at position 37 in tRNA(Phe) of both eukaryotes and archaea. In eukaryotes, five different enzymes are needed to form a final product, wybutosine (yW). In archaea, 4-demethylwyosine (imG-14) is an intermediate for the formation of three different wyosine deri...

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Autores principales: Urbonavičius, Jaunius, Tauraitė, Daiva
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7761594/
https://www.ncbi.nlm.nih.gov/pubmed/33276555
http://dx.doi.org/10.3390/biom10121627
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author Urbonavičius, Jaunius
Tauraitė, Daiva
author_facet Urbonavičius, Jaunius
Tauraitė, Daiva
author_sort Urbonavičius, Jaunius
collection PubMed
description Tricyclic wyosine derivatives are present at position 37 in tRNA(Phe) of both eukaryotes and archaea. In eukaryotes, five different enzymes are needed to form a final product, wybutosine (yW). In archaea, 4-demethylwyosine (imG-14) is an intermediate for the formation of three different wyosine derivatives, yW-72, imG, and mimG. In this review, current knowledge regarding the archaeal enzymes involved in this process and their reaction mechanisms are summarized. The experiments aimed to elucidate missing steps in biosynthesis pathways leading to the formation of wyosine derivatives are suggested. In addition, the chemical synthesis pathways of archaeal wyosine nucleosides are discussed, and the scheme for the formation of yW-86 and yW-72 is proposed. Recent data demonstrating that wyosine derivatives are present in the other tRNA species than those specific for phenylalanine are discussed.
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spelling pubmed-77615942020-12-26 Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea Urbonavičius, Jaunius Tauraitė, Daiva Biomolecules Review Tricyclic wyosine derivatives are present at position 37 in tRNA(Phe) of both eukaryotes and archaea. In eukaryotes, five different enzymes are needed to form a final product, wybutosine (yW). In archaea, 4-demethylwyosine (imG-14) is an intermediate for the formation of three different wyosine derivatives, yW-72, imG, and mimG. In this review, current knowledge regarding the archaeal enzymes involved in this process and their reaction mechanisms are summarized. The experiments aimed to elucidate missing steps in biosynthesis pathways leading to the formation of wyosine derivatives are suggested. In addition, the chemical synthesis pathways of archaeal wyosine nucleosides are discussed, and the scheme for the formation of yW-86 and yW-72 is proposed. Recent data demonstrating that wyosine derivatives are present in the other tRNA species than those specific for phenylalanine are discussed. MDPI 2020-12-02 /pmc/articles/PMC7761594/ /pubmed/33276555 http://dx.doi.org/10.3390/biom10121627 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Urbonavičius, Jaunius
Tauraitė, Daiva
Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
title Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
title_full Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
title_fullStr Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
title_full_unstemmed Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
title_short Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
title_sort biochemical pathways leading to the formation of wyosine derivatives in trna of archaea
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7761594/
https://www.ncbi.nlm.nih.gov/pubmed/33276555
http://dx.doi.org/10.3390/biom10121627
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