Cargando…
In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature
In metabolomics, mass spectrometry is used to detect a large number of low-molecular substances in a single analysis. Such a capacity could have direct application in disease diagnostics. However, it is challenging because of the analysis complexity, and the search for a way to simplify it while mai...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7762113/ https://www.ncbi.nlm.nih.gov/pubmed/33291514 http://dx.doi.org/10.3390/diagnostics10121052 |
_version_ | 1783627727604023296 |
---|---|
author | Lokhov, Petr G. Trifonova, Oxana P. Maslov, Dmitry L. Balashova, Elena E. |
author_facet | Lokhov, Petr G. Trifonova, Oxana P. Maslov, Dmitry L. Balashova, Elena E. |
author_sort | Lokhov, Petr G. |
collection | PubMed |
description | In metabolomics, mass spectrometry is used to detect a large number of low-molecular substances in a single analysis. Such a capacity could have direct application in disease diagnostics. However, it is challenging because of the analysis complexity, and the search for a way to simplify it while maintaining the diagnostic capability is an urgent task. It has been proposed to use the metabolomic signature without complex data processing (mass peak detection, alignment, normalization, and identification of substances, as well as any complex statistical analysis) to make the analysis more simple and rapid. Methods: A label-free approach was implemented in the metabolomic signature, which makes the measurement of the actual or conditional concentrations unnecessary, uses only mass peak relations, and minimizes mass spectra processing. The approach was tested on the diagnosis of impaired glucose tolerance (IGT). Results: The label-free metabolic signature demonstrated a diagnostic accuracy for IGT equal to 88% (specificity 85%, sensitivity 90%, and area under receiver operating characteristic curve (AUC) of 0.91), which is considered to be a good quality for diagnostics. Conclusions: It is possible to compile label-free signatures for diseases that allow for diagnosing the disease in situ, i.e., right at the mass spectrometer without complex data processing. This achievement makes all mass spectrometers potentially versatile diagnostic devices and accelerates the introduction of metabolomics into medicine. |
format | Online Article Text |
id | pubmed-7762113 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-77621132020-12-26 In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature Lokhov, Petr G. Trifonova, Oxana P. Maslov, Dmitry L. Balashova, Elena E. Diagnostics (Basel) Article In metabolomics, mass spectrometry is used to detect a large number of low-molecular substances in a single analysis. Such a capacity could have direct application in disease diagnostics. However, it is challenging because of the analysis complexity, and the search for a way to simplify it while maintaining the diagnostic capability is an urgent task. It has been proposed to use the metabolomic signature without complex data processing (mass peak detection, alignment, normalization, and identification of substances, as well as any complex statistical analysis) to make the analysis more simple and rapid. Methods: A label-free approach was implemented in the metabolomic signature, which makes the measurement of the actual or conditional concentrations unnecessary, uses only mass peak relations, and minimizes mass spectra processing. The approach was tested on the diagnosis of impaired glucose tolerance (IGT). Results: The label-free metabolic signature demonstrated a diagnostic accuracy for IGT equal to 88% (specificity 85%, sensitivity 90%, and area under receiver operating characteristic curve (AUC) of 0.91), which is considered to be a good quality for diagnostics. Conclusions: It is possible to compile label-free signatures for diseases that allow for diagnosing the disease in situ, i.e., right at the mass spectrometer without complex data processing. This achievement makes all mass spectrometers potentially versatile diagnostic devices and accelerates the introduction of metabolomics into medicine. MDPI 2020-12-05 /pmc/articles/PMC7762113/ /pubmed/33291514 http://dx.doi.org/10.3390/diagnostics10121052 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lokhov, Petr G. Trifonova, Oxana P. Maslov, Dmitry L. Balashova, Elena E. In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature |
title | In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature |
title_full | In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature |
title_fullStr | In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature |
title_full_unstemmed | In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature |
title_short | In Situ Mass Spectrometry Diagnostics of Impaired Glucose Tolerance Using Label-Free Metabolomic Signature |
title_sort | in situ mass spectrometry diagnostics of impaired glucose tolerance using label-free metabolomic signature |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7762113/ https://www.ncbi.nlm.nih.gov/pubmed/33291514 http://dx.doi.org/10.3390/diagnostics10121052 |
work_keys_str_mv | AT lokhovpetrg insitumassspectrometrydiagnosticsofimpairedglucosetoleranceusinglabelfreemetabolomicsignature AT trifonovaoxanap insitumassspectrometrydiagnosticsofimpairedglucosetoleranceusinglabelfreemetabolomicsignature AT maslovdmitryl insitumassspectrometrydiagnosticsofimpairedglucosetoleranceusinglabelfreemetabolomicsignature AT balashovaelenae insitumassspectrometrydiagnosticsofimpairedglucosetoleranceusinglabelfreemetabolomicsignature |