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Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images

The primary purpose of the reported research was to improve the discrete wavelet transform (DWT)-based JP3D compression of volumetric medical images by applying new methods that were only previously used in the compression of two-dimensional (2D) images. Namely, we applied reversible denoising and l...

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Detalles Bibliográficos
Autor principal: Starosolski, Roman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7762414/
https://www.ncbi.nlm.nih.gov/pubmed/33297589
http://dx.doi.org/10.3390/e22121385
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author Starosolski, Roman
author_facet Starosolski, Roman
author_sort Starosolski, Roman
collection PubMed
description The primary purpose of the reported research was to improve the discrete wavelet transform (DWT)-based JP3D compression of volumetric medical images by applying new methods that were only previously used in the compression of two-dimensional (2D) images. Namely, we applied reversible denoising and lifting steps with step skipping to three-dimensional (3D)-DWT and constructed a hybrid transform that combined 3D-DWT with prediction. We evaluated these methods using a test-set containing images of modalities: Computed Tomography (CT), Magnetic Resonance Imaging (MRI), and Ultrasound (US). They proved effective for 3D data resulting in over two times greater compression ratio improvements than competitive methods. While employing fast entropy estimation of JP3D compression ratio to reduce the cost of image-adaptive parameter selection for the new methods, we found that some MRI images had sparse histograms of intensity levels. We applied the classical histogram packing (HP) and found that, on average, it resulted in greater ratio improvements than the new sophisticated methods and that it could be combined with these new methods to further improve ratios. Finally, we proposed a few practical compression schemes that exploited HP, entropy estimation, and the new methods; on average, they improved the compression ratio by up to about 6.5% at an acceptable cost.
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spelling pubmed-77624142021-02-24 Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images Starosolski, Roman Entropy (Basel) Article The primary purpose of the reported research was to improve the discrete wavelet transform (DWT)-based JP3D compression of volumetric medical images by applying new methods that were only previously used in the compression of two-dimensional (2D) images. Namely, we applied reversible denoising and lifting steps with step skipping to three-dimensional (3D)-DWT and constructed a hybrid transform that combined 3D-DWT with prediction. We evaluated these methods using a test-set containing images of modalities: Computed Tomography (CT), Magnetic Resonance Imaging (MRI), and Ultrasound (US). They proved effective for 3D data resulting in over two times greater compression ratio improvements than competitive methods. While employing fast entropy estimation of JP3D compression ratio to reduce the cost of image-adaptive parameter selection for the new methods, we found that some MRI images had sparse histograms of intensity levels. We applied the classical histogram packing (HP) and found that, on average, it resulted in greater ratio improvements than the new sophisticated methods and that it could be combined with these new methods to further improve ratios. Finally, we proposed a few practical compression schemes that exploited HP, entropy estimation, and the new methods; on average, they improved the compression ratio by up to about 6.5% at an acceptable cost. MDPI 2020-12-07 /pmc/articles/PMC7762414/ /pubmed/33297589 http://dx.doi.org/10.3390/e22121385 Text en © 2020 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Starosolski, Roman
Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images
title Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images
title_full Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images
title_fullStr Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images
title_full_unstemmed Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images
title_short Employing New Hybrid Adaptive Wavelet-Based Transform and Histogram Packing to Improve JP3D Compression of Volumetric Medical Images
title_sort employing new hybrid adaptive wavelet-based transform and histogram packing to improve jp3d compression of volumetric medical images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7762414/
https://www.ncbi.nlm.nih.gov/pubmed/33297589
http://dx.doi.org/10.3390/e22121385
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