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Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors

N6-methyladenosine (m6A), internal modification of mRNA, has recently been reported to be an important regulatory mechanism affecting tumor proliferation. However, its role in endocrine system tumors is poorly understood. We obtained datasets for four types tumors from the TCGA database, analyzed th...

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Autores principales: Li, Kai, Luo, Haiqing, Luo, Hui, Zhu, Xiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7762517/
https://www.ncbi.nlm.nih.gov/pubmed/33237039
http://dx.doi.org/10.18632/aging.104064
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author Li, Kai
Luo, Haiqing
Luo, Hui
Zhu, Xiao
author_facet Li, Kai
Luo, Haiqing
Luo, Hui
Zhu, Xiao
author_sort Li, Kai
collection PubMed
description N6-methyladenosine (m6A), internal modification of mRNA, has recently been reported to be an important regulatory mechanism affecting tumor proliferation. However, its role in endocrine system tumors is poorly understood. We obtained datasets for four types tumors from the TCGA database, analyzed the GTEx database as a supplement to the control group, and used “Perl” and “R” software to analyze the datasets. Then we differentiated the expression level, used it to cluster consensus. Besides, we established lasso regression model to screen variables, used univariate and multivariate cox analyses to explore the independent risk factors associated with cancer prognosis. The results indicated that except for WTAP, the expression level of METTL3 was negatively correlated with other genes. The expression level of WTAP and METTL16 was positively correlated with overall survival (OS). Moreover, we found that different clinical subtypes of adrenal cortical carcinoma had significant differences in survival status, histologic grading, pathological T grade, and OS. Furthermore, different clinical subtypes of thyroid carcinoma had significant differences in histologic grading and pathological T grade. The differential expression of m6A regulatory genes is closely associated with the presence of endocrine-system-related tumors, and risk scores can be used to assess prognosis.
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spelling pubmed-77625172021-01-08 Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors Li, Kai Luo, Haiqing Luo, Hui Zhu, Xiao Aging (Albany NY) Research Paper N6-methyladenosine (m6A), internal modification of mRNA, has recently been reported to be an important regulatory mechanism affecting tumor proliferation. However, its role in endocrine system tumors is poorly understood. We obtained datasets for four types tumors from the TCGA database, analyzed the GTEx database as a supplement to the control group, and used “Perl” and “R” software to analyze the datasets. Then we differentiated the expression level, used it to cluster consensus. Besides, we established lasso regression model to screen variables, used univariate and multivariate cox analyses to explore the independent risk factors associated with cancer prognosis. The results indicated that except for WTAP, the expression level of METTL3 was negatively correlated with other genes. The expression level of WTAP and METTL16 was positively correlated with overall survival (OS). Moreover, we found that different clinical subtypes of adrenal cortical carcinoma had significant differences in survival status, histologic grading, pathological T grade, and OS. Furthermore, different clinical subtypes of thyroid carcinoma had significant differences in histologic grading and pathological T grade. The differential expression of m6A regulatory genes is closely associated with the presence of endocrine-system-related tumors, and risk scores can be used to assess prognosis. Impact Journals 2020-11-20 /pmc/articles/PMC7762517/ /pubmed/33237039 http://dx.doi.org/10.18632/aging.104064 Text en Copyright: © 2020 Li et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Li, Kai
Luo, Haiqing
Luo, Hui
Zhu, Xiao
Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors
title Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors
title_full Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors
title_fullStr Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors
title_full_unstemmed Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors
title_short Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumors
title_sort clinical and prognostic pan-cancer analysis of m6a rna methylation regulators in four types of endocrine system tumors
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7762517/
https://www.ncbi.nlm.nih.gov/pubmed/33237039
http://dx.doi.org/10.18632/aging.104064
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