Cargando…

Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato

Defensins are small and rather ubiquitous cysteine-rich anti-microbial peptides. These proteins may act against pathogenic microorganisms either directly (by binding and disrupting membranes) or indirectly (as signaling molecules that participate in the organization of the cellular defense). Even th...

Descripción completa

Detalles Bibliográficos
Autores principales: Nikoloudakis, Nikolaos, Pappi, Polyxeni, Markakis, Emmanouil A., Charova, Spyridoula N., Fanourakis, Dimitrios, Paschalidis, Konstantinos, Delis, Costas, Tzortzakakis, Emmanuel A., Tsaniklidis, Georgios
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7764197/
https://www.ncbi.nlm.nih.gov/pubmed/33317090
http://dx.doi.org/10.3390/ijms21249380
_version_ 1783628199266091008
author Nikoloudakis, Nikolaos
Pappi, Polyxeni
Markakis, Emmanouil A.
Charova, Spyridoula N.
Fanourakis, Dimitrios
Paschalidis, Konstantinos
Delis, Costas
Tzortzakakis, Emmanuel A.
Tsaniklidis, Georgios
author_facet Nikoloudakis, Nikolaos
Pappi, Polyxeni
Markakis, Emmanouil A.
Charova, Spyridoula N.
Fanourakis, Dimitrios
Paschalidis, Konstantinos
Delis, Costas
Tzortzakakis, Emmanuel A.
Tsaniklidis, Georgios
author_sort Nikoloudakis, Nikolaos
collection PubMed
description Defensins are small and rather ubiquitous cysteine-rich anti-microbial peptides. These proteins may act against pathogenic microorganisms either directly (by binding and disrupting membranes) or indirectly (as signaling molecules that participate in the organization of the cellular defense). Even though defensins are widespread across eukaryotes, still, extensive nucleotide and amino acid dissimilarities hamper the elucidation of their response to stimuli and mode of function. In the current study, we screened the Solanum lycopersicum genome for the identification of defensin genes, predicted the relating protein structures, and further studied their transcriptional responses to biotic (Verticillium dahliae, Meloidogyne javanica, Cucumber Mosaic Virus, and Potato Virus Y infections) and abiotic (cold stress) stimuli. Tomato defensin sequences were classified into two groups (C8 and C12). Our data indicate that the transcription of defensin coding genes primarily depends on the specific pathogen recognition patterns of V. dahliae and M. javanica. The immunodetection of plant defensin 1 protein was achieved only in the roots of plants inoculated with V. dahliae. In contrast, the almost null effects of viral infections and cold stress, and the failure to substantially induce the gene transcription suggest that these factors are probably not primarily targeted by the tomato defensin network.
format Online
Article
Text
id pubmed-7764197
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-77641972020-12-27 Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato Nikoloudakis, Nikolaos Pappi, Polyxeni Markakis, Emmanouil A. Charova, Spyridoula N. Fanourakis, Dimitrios Paschalidis, Konstantinos Delis, Costas Tzortzakakis, Emmanuel A. Tsaniklidis, Georgios Int J Mol Sci Article Defensins are small and rather ubiquitous cysteine-rich anti-microbial peptides. These proteins may act against pathogenic microorganisms either directly (by binding and disrupting membranes) or indirectly (as signaling molecules that participate in the organization of the cellular defense). Even though defensins are widespread across eukaryotes, still, extensive nucleotide and amino acid dissimilarities hamper the elucidation of their response to stimuli and mode of function. In the current study, we screened the Solanum lycopersicum genome for the identification of defensin genes, predicted the relating protein structures, and further studied their transcriptional responses to biotic (Verticillium dahliae, Meloidogyne javanica, Cucumber Mosaic Virus, and Potato Virus Y infections) and abiotic (cold stress) stimuli. Tomato defensin sequences were classified into two groups (C8 and C12). Our data indicate that the transcription of defensin coding genes primarily depends on the specific pathogen recognition patterns of V. dahliae and M. javanica. The immunodetection of plant defensin 1 protein was achieved only in the roots of plants inoculated with V. dahliae. In contrast, the almost null effects of viral infections and cold stress, and the failure to substantially induce the gene transcription suggest that these factors are probably not primarily targeted by the tomato defensin network. MDPI 2020-12-09 /pmc/articles/PMC7764197/ /pubmed/33317090 http://dx.doi.org/10.3390/ijms21249380 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nikoloudakis, Nikolaos
Pappi, Polyxeni
Markakis, Emmanouil A.
Charova, Spyridoula N.
Fanourakis, Dimitrios
Paschalidis, Konstantinos
Delis, Costas
Tzortzakakis, Emmanuel A.
Tsaniklidis, Georgios
Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato
title Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato
title_full Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato
title_fullStr Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato
title_full_unstemmed Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato
title_short Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato
title_sort structural diversity and highly specific host-pathogen transcriptional regulation of defensin genes is revealed in tomato
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7764197/
https://www.ncbi.nlm.nih.gov/pubmed/33317090
http://dx.doi.org/10.3390/ijms21249380
work_keys_str_mv AT nikoloudakisnikolaos structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT pappipolyxeni structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT markakisemmanouila structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT charovaspyridoulan structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT fanourakisdimitrios structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT paschalidiskonstantinos structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT deliscostas structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT tzortzakakisemmanuela structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato
AT tsaniklidisgeorgios structuraldiversityandhighlyspecifichostpathogentranscriptionalregulationofdefensingenesisrevealedintomato