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Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2

Glutamine synthetase (GS) catalyzes the condensation of ammonia and glutamate, along with ATP, to form glutamine. Despite extensive studies on GSs from eukaryotes and prokaryotes, the roles of the N-terminus and other structural features in catalysis remain unclear. Here we report the decameric stru...

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Autores principales: Chen, Wen-Ting, Yang, Hsin-Yu, Lin, Chih-Yu, Lee, Yi-Zong, Ma, Szu-Chin, Chen, Wei-Cheng, Yin, Hsien-Sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7764910/
https://www.ncbi.nlm.nih.gov/pubmed/33327463
http://dx.doi.org/10.3390/biom10121671
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author Chen, Wen-Ting
Yang, Hsin-Yu
Lin, Chih-Yu
Lee, Yi-Zong
Ma, Szu-Chin
Chen, Wei-Cheng
Yin, Hsien-Sheng
author_facet Chen, Wen-Ting
Yang, Hsin-Yu
Lin, Chih-Yu
Lee, Yi-Zong
Ma, Szu-Chin
Chen, Wei-Cheng
Yin, Hsien-Sheng
author_sort Chen, Wen-Ting
collection PubMed
description Glutamine synthetase (GS) catalyzes the condensation of ammonia and glutamate, along with ATP, to form glutamine. Despite extensive studies on GSs from eukaryotes and prokaryotes, the roles of the N-terminus and other structural features in catalysis remain unclear. Here we report the decameric structure of Drosophila melanogaster GS 2 (DmGS2). The N-terminal short helices, α1 and α2, constitute a meander region, and form hydrogen bonds with residues 3–5 in the N-terminal loop, which are not present in the GSs of other species. Deletion of α1 or α1-α2 inactivates DmGS2. Notably, the Arg4 in each monomer of one pentamer forms hydrogen bonds with Glu7, and Asp8 in the adjacent monomer of the other pentamer. Replacement of Arg4 with Asp (R4D) abolishes activity. Analytical ultracentrifugation revealed that Arg4 is crucial for oligomerization. Circular dichroism spectra revealed that R4D may alter the secondary structure. We mutated key residues to identify the substrate-binding site. As Glu140 binds glutamate and Glu311 binds ammonia, mutants E140A and E311A have little activity. Conversely, mutant P214A (P contributes to ATP binding) has higher activity than wild-type DmGS2. These findings expand the understanding of the structural and functional features of the N-terminal meander region of DmGS2 and the residues important for catalytic efficiency.
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spelling pubmed-77649102020-12-27 Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2 Chen, Wen-Ting Yang, Hsin-Yu Lin, Chih-Yu Lee, Yi-Zong Ma, Szu-Chin Chen, Wei-Cheng Yin, Hsien-Sheng Biomolecules Article Glutamine synthetase (GS) catalyzes the condensation of ammonia and glutamate, along with ATP, to form glutamine. Despite extensive studies on GSs from eukaryotes and prokaryotes, the roles of the N-terminus and other structural features in catalysis remain unclear. Here we report the decameric structure of Drosophila melanogaster GS 2 (DmGS2). The N-terminal short helices, α1 and α2, constitute a meander region, and form hydrogen bonds with residues 3–5 in the N-terminal loop, which are not present in the GSs of other species. Deletion of α1 or α1-α2 inactivates DmGS2. Notably, the Arg4 in each monomer of one pentamer forms hydrogen bonds with Glu7, and Asp8 in the adjacent monomer of the other pentamer. Replacement of Arg4 with Asp (R4D) abolishes activity. Analytical ultracentrifugation revealed that Arg4 is crucial for oligomerization. Circular dichroism spectra revealed that R4D may alter the secondary structure. We mutated key residues to identify the substrate-binding site. As Glu140 binds glutamate and Glu311 binds ammonia, mutants E140A and E311A have little activity. Conversely, mutant P214A (P contributes to ATP binding) has higher activity than wild-type DmGS2. These findings expand the understanding of the structural and functional features of the N-terminal meander region of DmGS2 and the residues important for catalytic efficiency. MDPI 2020-12-14 /pmc/articles/PMC7764910/ /pubmed/33327463 http://dx.doi.org/10.3390/biom10121671 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Wen-Ting
Yang, Hsin-Yu
Lin, Chih-Yu
Lee, Yi-Zong
Ma, Szu-Chin
Chen, Wei-Cheng
Yin, Hsien-Sheng
Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2
title Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2
title_full Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2
title_fullStr Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2
title_full_unstemmed Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2
title_short Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2
title_sort structural insight into the contributions of the n-terminus and key active-site residues to the catalytic efficiency of glutamine synthetase 2
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7764910/
https://www.ncbi.nlm.nih.gov/pubmed/33327463
http://dx.doi.org/10.3390/biom10121671
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