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Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing

As in many autoimmune diseases, the pathogenesis of the antiphospholipid syndrome (APS) is the result of a complex interplay between predisposing genes and triggering environmental factors, leading to a loss of self-tolerance and immune-mediated tissue damage. While the first genetic studies in APS...

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Autores principales: Barinotti, Alice, Radin, Massimo, Cecchi, Irene, Foddai, Silvia Grazietta, Rubini, Elena, Roccatello, Dario, Sciascia, Savino, Menegatti, Elisa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7765384/
https://www.ncbi.nlm.nih.gov/pubmed/33333988
http://dx.doi.org/10.3390/ijms21249551
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author Barinotti, Alice
Radin, Massimo
Cecchi, Irene
Foddai, Silvia Grazietta
Rubini, Elena
Roccatello, Dario
Sciascia, Savino
Menegatti, Elisa
author_facet Barinotti, Alice
Radin, Massimo
Cecchi, Irene
Foddai, Silvia Grazietta
Rubini, Elena
Roccatello, Dario
Sciascia, Savino
Menegatti, Elisa
author_sort Barinotti, Alice
collection PubMed
description As in many autoimmune diseases, the pathogenesis of the antiphospholipid syndrome (APS) is the result of a complex interplay between predisposing genes and triggering environmental factors, leading to a loss of self-tolerance and immune-mediated tissue damage. While the first genetic studies in APS focused primarily on the human leukocytes antigen system (HLA) region, more recent data highlighted the role of other genes in APS susceptibility, including those involved in the immune response and in the hemostatic process. In order to join this intriguing debate, we analyzed the single-nucleotide polymorphisms (SNPs) derived from the whole exome sequencing (WES) of two siblings affected by APS and compared our findings with the available literature. We identified genes encoding proteins involved in the hemostatic process, the immune response, and the phospholipid metabolism (PLA2G6, HSPG2, BCL3, ZFAT, ATP2B2, CRTC3, and ADCY3) of potential interest when debating the pathogenesis of the syndrome. The study of the selected SNPs in a larger cohort of APS patients and the integration of WES results with the network-based approaches will help decipher the genetic risk factors involved in the diverse clinical features of APS.
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spelling pubmed-77653842020-12-27 Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing Barinotti, Alice Radin, Massimo Cecchi, Irene Foddai, Silvia Grazietta Rubini, Elena Roccatello, Dario Sciascia, Savino Menegatti, Elisa Int J Mol Sci Review As in many autoimmune diseases, the pathogenesis of the antiphospholipid syndrome (APS) is the result of a complex interplay between predisposing genes and triggering environmental factors, leading to a loss of self-tolerance and immune-mediated tissue damage. While the first genetic studies in APS focused primarily on the human leukocytes antigen system (HLA) region, more recent data highlighted the role of other genes in APS susceptibility, including those involved in the immune response and in the hemostatic process. In order to join this intriguing debate, we analyzed the single-nucleotide polymorphisms (SNPs) derived from the whole exome sequencing (WES) of two siblings affected by APS and compared our findings with the available literature. We identified genes encoding proteins involved in the hemostatic process, the immune response, and the phospholipid metabolism (PLA2G6, HSPG2, BCL3, ZFAT, ATP2B2, CRTC3, and ADCY3) of potential interest when debating the pathogenesis of the syndrome. The study of the selected SNPs in a larger cohort of APS patients and the integration of WES results with the network-based approaches will help decipher the genetic risk factors involved in the diverse clinical features of APS. MDPI 2020-12-15 /pmc/articles/PMC7765384/ /pubmed/33333988 http://dx.doi.org/10.3390/ijms21249551 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Barinotti, Alice
Radin, Massimo
Cecchi, Irene
Foddai, Silvia Grazietta
Rubini, Elena
Roccatello, Dario
Sciascia, Savino
Menegatti, Elisa
Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing
title Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing
title_full Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing
title_fullStr Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing
title_full_unstemmed Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing
title_short Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing
title_sort genetic factors in antiphospholipid syndrome: preliminary experience with whole exome sequencing
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7765384/
https://www.ncbi.nlm.nih.gov/pubmed/33333988
http://dx.doi.org/10.3390/ijms21249551
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