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Bioorthogonal Reactions in Activity-Based Protein Profiling

Activity-based protein profiling (ABPP) is a powerful technique to label and detect active enzyme species within cell lysates, cells, or whole animals. In the last two decades, a wide variety of applications and experimental read-out techniques have been pursued in order to increase our understandin...

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Autores principales: Verhelst, Steven H. L., Bonger, Kimberly M., Willems, Lianne I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7765892/
https://www.ncbi.nlm.nih.gov/pubmed/33352858
http://dx.doi.org/10.3390/molecules25245994
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author Verhelst, Steven H. L.
Bonger, Kimberly M.
Willems, Lianne I.
author_facet Verhelst, Steven H. L.
Bonger, Kimberly M.
Willems, Lianne I.
author_sort Verhelst, Steven H. L.
collection PubMed
description Activity-based protein profiling (ABPP) is a powerful technique to label and detect active enzyme species within cell lysates, cells, or whole animals. In the last two decades, a wide variety of applications and experimental read-out techniques have been pursued in order to increase our understanding of physiological and pathological processes, to identify novel drug targets, to evaluate selectivity of drugs, and to image probe targets in cells. Bioorthogonal chemistry has substantially contributed to the field of ABPP, as it allows the introduction of tags, which may be bulky or have unfavorable physicochemical properties, at a late stage in the experiment. In this review, we give an overview of the bioorthogonal reactions that have been implemented in ABPP, provide examples of applications of bioorthogonal chemistry in ABPP, and share some thoughts on future directions.
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spelling pubmed-77658922020-12-28 Bioorthogonal Reactions in Activity-Based Protein Profiling Verhelst, Steven H. L. Bonger, Kimberly M. Willems, Lianne I. Molecules Review Activity-based protein profiling (ABPP) is a powerful technique to label and detect active enzyme species within cell lysates, cells, or whole animals. In the last two decades, a wide variety of applications and experimental read-out techniques have been pursued in order to increase our understanding of physiological and pathological processes, to identify novel drug targets, to evaluate selectivity of drugs, and to image probe targets in cells. Bioorthogonal chemistry has substantially contributed to the field of ABPP, as it allows the introduction of tags, which may be bulky or have unfavorable physicochemical properties, at a late stage in the experiment. In this review, we give an overview of the bioorthogonal reactions that have been implemented in ABPP, provide examples of applications of bioorthogonal chemistry in ABPP, and share some thoughts on future directions. MDPI 2020-12-18 /pmc/articles/PMC7765892/ /pubmed/33352858 http://dx.doi.org/10.3390/molecules25245994 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Verhelst, Steven H. L.
Bonger, Kimberly M.
Willems, Lianne I.
Bioorthogonal Reactions in Activity-Based Protein Profiling
title Bioorthogonal Reactions in Activity-Based Protein Profiling
title_full Bioorthogonal Reactions in Activity-Based Protein Profiling
title_fullStr Bioorthogonal Reactions in Activity-Based Protein Profiling
title_full_unstemmed Bioorthogonal Reactions in Activity-Based Protein Profiling
title_short Bioorthogonal Reactions in Activity-Based Protein Profiling
title_sort bioorthogonal reactions in activity-based protein profiling
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7765892/
https://www.ncbi.nlm.nih.gov/pubmed/33352858
http://dx.doi.org/10.3390/molecules25245994
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