Cargando…

Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy

Gastric cancer (GC) is the fifth most prevalent cancer worldwide and the third leading cause of global cancer mortality. With the advances of the omic studies, a heterogeneous GC landscape has been revealed, with significant molecular diversity. Given the multifaceted nature of GC, identification of...

Descripción completa

Detalles Bibliográficos
Autores principales: Ravegnini, Gloria, Fosso, Bruno, Saverio, Viola Di, Sammarini, Giulia, Zanotti, Federica, Rossi, Giulio, Ricci, Monica, D’Amico, Federica, Valori, Giorgia, Ioli, Antonella, Turroni, Silvia, Brigidi, Patrizia, Hrelia, Patrizia, Angelini, Sabrina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7766162/
https://www.ncbi.nlm.nih.gov/pubmed/33419357
http://dx.doi.org/10.3390/ijms21249735
_version_ 1783628653047840768
author Ravegnini, Gloria
Fosso, Bruno
Saverio, Viola Di
Sammarini, Giulia
Zanotti, Federica
Rossi, Giulio
Ricci, Monica
D’Amico, Federica
Valori, Giorgia
Ioli, Antonella
Turroni, Silvia
Brigidi, Patrizia
Hrelia, Patrizia
Angelini, Sabrina
author_facet Ravegnini, Gloria
Fosso, Bruno
Saverio, Viola Di
Sammarini, Giulia
Zanotti, Federica
Rossi, Giulio
Ricci, Monica
D’Amico, Federica
Valori, Giorgia
Ioli, Antonella
Turroni, Silvia
Brigidi, Patrizia
Hrelia, Patrizia
Angelini, Sabrina
author_sort Ravegnini, Gloria
collection PubMed
description Gastric cancer (GC) is the fifth most prevalent cancer worldwide and the third leading cause of global cancer mortality. With the advances of the omic studies, a heterogeneous GC landscape has been revealed, with significant molecular diversity. Given the multifaceted nature of GC, identification of different patient subsets with prognostic and/or predictive outcomes is a key aspect to allow tailoring of specific treatments. Recently, the involvement of the microbiota in gastric carcinogenesis has been described. To deepen this aspect, we compared microbiota composition in signet-ring cell carcinoma (SRCC) and adenocarcinoma (ADC), two distinct GC subtypes. To this purpose, 10 ADC and 10 SRCC and their paired non-tumor (PNT) counterparts were evaluated for microbiota composition through 16S rRNA analysis. Weighted and unweighted UniFrac and Bray–Curtis dissimilarity showed significant community-level separation between ADC and SRCC. Through the LEfSe (linear discriminant analysis coupled with effect size) tool, we identified potential microbial biomarkers associated with GC subtypes. In particular, SRCCs were significantly enriched in the phyla Fusobacteria, Bacteroidetes, Patescibacteria, whereas in the ADC type, Proteobacteria and Acidobacteria phyla were found. Overall, our data add new insights into GC heterogeneity and may contribute to deepening the GC classification.
format Online
Article
Text
id pubmed-7766162
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-77661622020-12-28 Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy Ravegnini, Gloria Fosso, Bruno Saverio, Viola Di Sammarini, Giulia Zanotti, Federica Rossi, Giulio Ricci, Monica D’Amico, Federica Valori, Giorgia Ioli, Antonella Turroni, Silvia Brigidi, Patrizia Hrelia, Patrizia Angelini, Sabrina Int J Mol Sci Article Gastric cancer (GC) is the fifth most prevalent cancer worldwide and the third leading cause of global cancer mortality. With the advances of the omic studies, a heterogeneous GC landscape has been revealed, with significant molecular diversity. Given the multifaceted nature of GC, identification of different patient subsets with prognostic and/or predictive outcomes is a key aspect to allow tailoring of specific treatments. Recently, the involvement of the microbiota in gastric carcinogenesis has been described. To deepen this aspect, we compared microbiota composition in signet-ring cell carcinoma (SRCC) and adenocarcinoma (ADC), two distinct GC subtypes. To this purpose, 10 ADC and 10 SRCC and their paired non-tumor (PNT) counterparts were evaluated for microbiota composition through 16S rRNA analysis. Weighted and unweighted UniFrac and Bray–Curtis dissimilarity showed significant community-level separation between ADC and SRCC. Through the LEfSe (linear discriminant analysis coupled with effect size) tool, we identified potential microbial biomarkers associated with GC subtypes. In particular, SRCCs were significantly enriched in the phyla Fusobacteria, Bacteroidetes, Patescibacteria, whereas in the ADC type, Proteobacteria and Acidobacteria phyla were found. Overall, our data add new insights into GC heterogeneity and may contribute to deepening the GC classification. MDPI 2020-12-20 /pmc/articles/PMC7766162/ /pubmed/33419357 http://dx.doi.org/10.3390/ijms21249735 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ravegnini, Gloria
Fosso, Bruno
Saverio, Viola Di
Sammarini, Giulia
Zanotti, Federica
Rossi, Giulio
Ricci, Monica
D’Amico, Federica
Valori, Giorgia
Ioli, Antonella
Turroni, Silvia
Brigidi, Patrizia
Hrelia, Patrizia
Angelini, Sabrina
Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy
title Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy
title_full Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy
title_fullStr Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy
title_full_unstemmed Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy
title_short Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis—Deepening Heterogeneity for a Personalized Therapy
title_sort gastric adenocarcinomas and signet-ring cell carcinoma: unraveling gastric cancer complexity through microbiome analysis—deepening heterogeneity for a personalized therapy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7766162/
https://www.ncbi.nlm.nih.gov/pubmed/33419357
http://dx.doi.org/10.3390/ijms21249735
work_keys_str_mv AT ravegninigloria gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT fossobruno gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT saveriovioladi gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT sammarinigiulia gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT zanottifederica gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT rossigiulio gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT riccimonica gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT damicofederica gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT valorigiorgia gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT ioliantonella gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT turronisilvia gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT brigidipatrizia gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT hreliapatrizia gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy
AT angelinisabrina gastricadenocarcinomasandsignetringcellcarcinomaunravelinggastriccancercomplexitythroughmicrobiomeanalysisdeepeningheterogeneityforapersonalizedtherapy