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Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19

SIMPLE SUMMARY: Using tools from both mathematics (especially wavelet theory) and computer science (machine learning), we present a general new method for modelling the evolution of epidemics which is not restricted to human populations. A crucial novel feature of our approach is that it significant...

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Autores principales: Tat Dat, Tô, Frédéric, Protin, Hang, Nguyen T. T., Jules, Martel, Duc Thang, Nguyen, Piffault, Charles, Willy, Rodríguez, Susely, Figueroa, Lê, Hông Vân, Tuschmann, Wilderich, Tien Zung, Nguyen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7767158/
https://www.ncbi.nlm.nih.gov/pubmed/33353045
http://dx.doi.org/10.3390/biology9120477
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author Tat Dat, Tô
Frédéric, Protin
Hang, Nguyen T. T.
Jules, Martel
Duc Thang, Nguyen
Piffault, Charles
Willy, Rodríguez
Susely, Figueroa
Lê, Hông Vân
Tuschmann, Wilderich
Tien Zung, Nguyen
author_facet Tat Dat, Tô
Frédéric, Protin
Hang, Nguyen T. T.
Jules, Martel
Duc Thang, Nguyen
Piffault, Charles
Willy, Rodríguez
Susely, Figueroa
Lê, Hông Vân
Tuschmann, Wilderich
Tien Zung, Nguyen
author_sort Tat Dat, Tô
collection PubMed
description SIMPLE SUMMARY: Using tools from both mathematics (especially wavelet theory) and computer science (machine learning), we present a general new method for modelling the evolution of epidemics which is not restricted to human populations. A crucial novel feature of our approach is that it significantly takes into account that an epidemic may take place in certain types of waves which cannot only be of a global as well as local nature, but can also occur at multiple different times and locations. In the particular case of the current Covid-19 pandemic, based on recent figures from the Johns Hopkins database we apply our model to France, Germany, Italy, the Czech Republic, as well as the US federal states New York and Florida, and compare it and its predictions to established as well as other recently developed forecasting methods and techniques. ABSTRACT: We introduce the concept of epidemic-fitted wavelets which comprise, in particular, as special cases the number [Formula: see text] of infectious individuals at time t in classical SIR models and their derivatives. We present a novel method for modelling epidemic dynamics by a model selection method using wavelet theory and, for its applications, machine learning-based curve fitting techniques. Our universal models are functions that are finite linear combinations of epidemic-fitted wavelets. We apply our method by modelling and forecasting, based on the Johns Hopkins University dataset, the spread of the current Covid-19 (SARS-CoV-2) epidemic in France, Germany, Italy and the Czech Republic, as well as in the US federal states New York and Florida.
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spelling pubmed-77671582020-12-28 Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19 Tat Dat, Tô Frédéric, Protin Hang, Nguyen T. T. Jules, Martel Duc Thang, Nguyen Piffault, Charles Willy, Rodríguez Susely, Figueroa Lê, Hông Vân Tuschmann, Wilderich Tien Zung, Nguyen Biology (Basel) Article SIMPLE SUMMARY: Using tools from both mathematics (especially wavelet theory) and computer science (machine learning), we present a general new method for modelling the evolution of epidemics which is not restricted to human populations. A crucial novel feature of our approach is that it significantly takes into account that an epidemic may take place in certain types of waves which cannot only be of a global as well as local nature, but can also occur at multiple different times and locations. In the particular case of the current Covid-19 pandemic, based on recent figures from the Johns Hopkins database we apply our model to France, Germany, Italy, the Czech Republic, as well as the US federal states New York and Florida, and compare it and its predictions to established as well as other recently developed forecasting methods and techniques. ABSTRACT: We introduce the concept of epidemic-fitted wavelets which comprise, in particular, as special cases the number [Formula: see text] of infectious individuals at time t in classical SIR models and their derivatives. We present a novel method for modelling epidemic dynamics by a model selection method using wavelet theory and, for its applications, machine learning-based curve fitting techniques. Our universal models are functions that are finite linear combinations of epidemic-fitted wavelets. We apply our method by modelling and forecasting, based on the Johns Hopkins University dataset, the spread of the current Covid-19 (SARS-CoV-2) epidemic in France, Germany, Italy and the Czech Republic, as well as in the US federal states New York and Florida. MDPI 2020-12-18 /pmc/articles/PMC7767158/ /pubmed/33353045 http://dx.doi.org/10.3390/biology9120477 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tat Dat, Tô
Frédéric, Protin
Hang, Nguyen T. T.
Jules, Martel
Duc Thang, Nguyen
Piffault, Charles
Willy, Rodríguez
Susely, Figueroa
Lê, Hông Vân
Tuschmann, Wilderich
Tien Zung, Nguyen
Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19
title Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19
title_full Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19
title_fullStr Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19
title_full_unstemmed Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19
title_short Epidemic Dynamics via Wavelet Theory and Machine Learning with Applications to Covid-19
title_sort epidemic dynamics via wavelet theory and machine learning with applications to covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7767158/
https://www.ncbi.nlm.nih.gov/pubmed/33353045
http://dx.doi.org/10.3390/biology9120477
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