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1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles
BACKGROUND: A 60-year-old woman with acute myeloid leukemia developed fever and cough post induction chemotherapy. Meropenem and vancomycin were administered as empiric therapy. A bloodstream infection due to resistant E. meningoseptica was initially identified. Ceftazidime-avibactam and aztreonam (...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7776918/ http://dx.doi.org/10.1093/ofid/ofaa439.1625 |
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author | Yasmin, Mohamad Marshall, Steven Marshall, Emma Cmolik, Anna Boucher, Helen Vila, Alejandro Bonomo, Robert A |
author_facet | Yasmin, Mohamad Marshall, Steven Marshall, Emma Cmolik, Anna Boucher, Helen Vila, Alejandro Bonomo, Robert A |
author_sort | Yasmin, Mohamad |
collection | PubMed |
description | BACKGROUND: A 60-year-old woman with acute myeloid leukemia developed fever and cough post induction chemotherapy. Meropenem and vancomycin were administered as empiric therapy. A bloodstream infection due to resistant E. meningoseptica was initially identified. Ceftazidime-avibactam and aztreonam (ATM) were next administered. Minocycline and trimethoprim/sulfamethoxazole (TMP/SMX) were added as the patient deteriorated and died ten days later. METHODS: MIC testing /disc diffusion assays were done according to CLSI guidelines. Whole genome sequencing (WGS) was performed, assembled, and annotated using PATRIC.org and compared to Institute Pasteur cgMLST instance of the BIGSdb database tool. Resistant genes and plasmids were identified by the Center for Genomic epidemiology. RESULTS: Core genome MLST and average nucleotide identity of 99.46% revealed the organism as E. anophelis, not E. meningoseptica. The WGS assembly resulted in 118 contigs with a chromosome of 4,110,726 bp. Plasmids were not identified. Resistance genes bla(B11), bla(GOB-13) (a metallo beta-lactamase) and bla(CME-1) were detected. E. anophelis was resistant to multiple drug classes including aminoglycosides, vancomycin, cephalosporins, and carbapenems. Mechanism based susceptibility testing using double-disc diffusion assays demonstrated susceptibility to cefiderocol (MIC 1 µg/ml), minocycline, TMP/SMX, linezolid, and modestly wider zones of inhibition with the addition of ATM. Susceptibility results are shown in Table 1. Antimicrobial susceptibility testing using various BLIs and combinations with Aztreonam [Image: see text] CONCLUSION: This is one of the first reports describing E. anophelis in immunocompromised hosts. More thorough testing methods are needed for distinguishing between species in the Elizabethkingia genus in hospital settings as there is concern that this may represent a novel opportunistic infection. Per CDC, E. anophelis outbreaks have occurred in three Midwestern states in 2016. Vigilance is warranted to the role of this pathogen in immunocompromised hosts. DISCLOSURES: Robert A. Bonomo, MD, Entasis, Merck, Venatorx (Research Grant or Support) |
format | Online Article Text |
id | pubmed-7776918 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77769182021-01-07 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles Yasmin, Mohamad Marshall, Steven Marshall, Emma Cmolik, Anna Boucher, Helen Vila, Alejandro Bonomo, Robert A Open Forum Infect Dis Poster Abstracts BACKGROUND: A 60-year-old woman with acute myeloid leukemia developed fever and cough post induction chemotherapy. Meropenem and vancomycin were administered as empiric therapy. A bloodstream infection due to resistant E. meningoseptica was initially identified. Ceftazidime-avibactam and aztreonam (ATM) were next administered. Minocycline and trimethoprim/sulfamethoxazole (TMP/SMX) were added as the patient deteriorated and died ten days later. METHODS: MIC testing /disc diffusion assays were done according to CLSI guidelines. Whole genome sequencing (WGS) was performed, assembled, and annotated using PATRIC.org and compared to Institute Pasteur cgMLST instance of the BIGSdb database tool. Resistant genes and plasmids were identified by the Center for Genomic epidemiology. RESULTS: Core genome MLST and average nucleotide identity of 99.46% revealed the organism as E. anophelis, not E. meningoseptica. The WGS assembly resulted in 118 contigs with a chromosome of 4,110,726 bp. Plasmids were not identified. Resistance genes bla(B11), bla(GOB-13) (a metallo beta-lactamase) and bla(CME-1) were detected. E. anophelis was resistant to multiple drug classes including aminoglycosides, vancomycin, cephalosporins, and carbapenems. Mechanism based susceptibility testing using double-disc diffusion assays demonstrated susceptibility to cefiderocol (MIC 1 µg/ml), minocycline, TMP/SMX, linezolid, and modestly wider zones of inhibition with the addition of ATM. Susceptibility results are shown in Table 1. Antimicrobial susceptibility testing using various BLIs and combinations with Aztreonam [Image: see text] CONCLUSION: This is one of the first reports describing E. anophelis in immunocompromised hosts. More thorough testing methods are needed for distinguishing between species in the Elizabethkingia genus in hospital settings as there is concern that this may represent a novel opportunistic infection. Per CDC, E. anophelis outbreaks have occurred in three Midwestern states in 2016. Vigilance is warranted to the role of this pathogen in immunocompromised hosts. DISCLOSURES: Robert A. Bonomo, MD, Entasis, Merck, Venatorx (Research Grant or Support) Oxford University Press 2020-12-31 /pmc/articles/PMC7776918/ http://dx.doi.org/10.1093/ofid/ofaa439.1625 Text en © The Author 2020. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Poster Abstracts Yasmin, Mohamad Marshall, Steven Marshall, Emma Cmolik, Anna Boucher, Helen Vila, Alejandro Bonomo, Robert A 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles |
title | 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles |
title_full | 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles |
title_fullStr | 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles |
title_full_unstemmed | 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles |
title_short | 1444. Characterization of a Novel Pathogen in Immunocompromised Patients: Elizabethkingia Anopheles |
title_sort | 1444. characterization of a novel pathogen in immunocompromised patients: elizabethkingia anopheles |
topic | Poster Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7776918/ http://dx.doi.org/10.1093/ofid/ofaa439.1625 |
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