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Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults
Type 2 diabetes mellitus (T2DM) is an important public health problem. The knowledge of bacterial communities in the gut of Vietnamese patients with T2DM and non diabetic controls is still insufficient. We report in this article the 16S rDNA amplicon data of the gut microbiomes of Vietnamese patient...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7776958/ https://www.ncbi.nlm.nih.gov/pubmed/33426245 http://dx.doi.org/10.1016/j.dib.2020.106690 |
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author | Hoang, Hung The Le, Duc Hoang Le, Thi Thanh Huyen Nguyen, Thi Tuyet Nhung Chu, Ha Hoang Nguyen, Nam Trung |
author_facet | Hoang, Hung The Le, Duc Hoang Le, Thi Thanh Huyen Nguyen, Thi Tuyet Nhung Chu, Ha Hoang Nguyen, Nam Trung |
author_sort | Hoang, Hung The |
collection | PubMed |
description | Type 2 diabetes mellitus (T2DM) is an important public health problem. The knowledge of bacterial communities in the gut of Vietnamese patients with T2DM and non diabetic controls is still insufficient. We report in this article the 16S rDNA amplicon data of the gut microbiomes of Vietnamese patients with T2DM and nondiabetic controls carried out using the Illumina sequencing. This work included 7 patients and 7 controls. A total of 1,627,646 reads were obtained and a total of 13 phyla, 25 classes, 94 genera were revealed. The top three dominant bacterial phyla in all subjects were Firmicutes, Bacteroidetes and Proteobacteria. Significant differences in the relative abundances of the phylum Firmicutes and class Clostridia between patients and controls were observed, suggesting that the reducing of phylum Firmicutes and class Clostridia in the gut may be linked to obesity and T2DM. All sequencing libraries were deposited in the NCBI SRA as BioProject PRJNA668251. The datasets are needed to determine the association between the bacterial composition of the gut and the pathogenesis of T2DM in Vietnamese patients. |
format | Online Article Text |
id | pubmed-7776958 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-77769582021-01-07 Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults Hoang, Hung The Le, Duc Hoang Le, Thi Thanh Huyen Nguyen, Thi Tuyet Nhung Chu, Ha Hoang Nguyen, Nam Trung Data Brief Data Article Type 2 diabetes mellitus (T2DM) is an important public health problem. The knowledge of bacterial communities in the gut of Vietnamese patients with T2DM and non diabetic controls is still insufficient. We report in this article the 16S rDNA amplicon data of the gut microbiomes of Vietnamese patients with T2DM and nondiabetic controls carried out using the Illumina sequencing. This work included 7 patients and 7 controls. A total of 1,627,646 reads were obtained and a total of 13 phyla, 25 classes, 94 genera were revealed. The top three dominant bacterial phyla in all subjects were Firmicutes, Bacteroidetes and Proteobacteria. Significant differences in the relative abundances of the phylum Firmicutes and class Clostridia between patients and controls were observed, suggesting that the reducing of phylum Firmicutes and class Clostridia in the gut may be linked to obesity and T2DM. All sequencing libraries were deposited in the NCBI SRA as BioProject PRJNA668251. The datasets are needed to determine the association between the bacterial composition of the gut and the pathogenesis of T2DM in Vietnamese patients. Elsevier 2020-12-24 /pmc/articles/PMC7776958/ /pubmed/33426245 http://dx.doi.org/10.1016/j.dib.2020.106690 Text en © 2020 The Authors. Published by Elsevier Inc. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Hoang, Hung The Le, Duc Hoang Le, Thi Thanh Huyen Nguyen, Thi Tuyet Nhung Chu, Ha Hoang Nguyen, Nam Trung Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults |
title | Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults |
title_full | Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults |
title_fullStr | Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults |
title_full_unstemmed | Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults |
title_short | Metagenomic 16S rDNA amplicon data of microbial diversity of guts in Vietnamese humans with type 2 diabetes and nondiabetic adults |
title_sort | metagenomic 16s rdna amplicon data of microbial diversity of guts in vietnamese humans with type 2 diabetes and nondiabetic adults |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7776958/ https://www.ncbi.nlm.nih.gov/pubmed/33426245 http://dx.doi.org/10.1016/j.dib.2020.106690 |
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