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694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population
BACKGROUND: Rotavirus (RV) is the leading cause of viral gastroenteritis in children. Although RV genotypes differ geographically and temporally, five are the predominant genotypes circulating worldwide. Aim of our study was to monitor possible changes in distribution of Rotavirus genotypes circulat...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7777887/ http://dx.doi.org/10.1093/ofid/ofaa439.886 |
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author | Koukou, Dimitra Chatzichristou, Panagiota Tatsi, Elizabeth-Barbara Liakopoulou, Theodota Chronopoulou, Genovepha Michos, Athanasios Syriopoulou, Vassiliki |
author_facet | Koukou, Dimitra Chatzichristou, Panagiota Tatsi, Elizabeth-Barbara Liakopoulou, Theodota Chronopoulou, Genovepha Michos, Athanasios Syriopoulou, Vassiliki |
author_sort | Koukou, Dimitra |
collection | PubMed |
description | BACKGROUND: Rotavirus (RV) is the leading cause of viral gastroenteritis in children. Although RV genotypes differ geographically and temporally, five are the predominant genotypes circulating worldwide. Aim of our study was to monitor possible changes in distribution of Rotavirus genotypes circulating in Greek pediatric population during the post vaccine era. METHODS: Demographic data and fecal samples were collected from children ≤15 years old with symptoms of acute gastroenteritis who visited emergency units of Pediatric Hospitals in Greece from September 2016 to August 2019. Samples were tested for RV Group A antigen with rapid immunochromatographic assay. Positive samples were further G and P typed employing RT-PCR, semi-nested multiplex PCR and Sanger sequencing of the VP7 and VP4 genes. RESULTS: A total of 660 children participated in the study with median age 31±29 months. Males outnumbered females (59%). Most of them lived in urban cities (85%). RV genotyping distribution was G4P[8] (41%), G1P[8] (22%), G2P[4] (14%), G9P[8] (8%), G9P[4] (5,5%), G12P[8] (2%) and G3P[8] (1,8%). Unusual and mixed genotypes were identified in 3,2% and 2,5% of the samples respectively. During 2016-2017 and 2017-2018, G4P[8] was the predominant genotype in 67% and 51% of the annual samples. However, in 2018-2019 the most common genotypes were G9P[8] and G9P[4] (33% in total) followed by G2P[4] (27%). Interestingly, the genotype G9P[4] was not detected at all in the first two years of the study. CONCLUSION: This study indicates diversity of the predominant RV genotypes in Greek children during 2016-2019. The emergence of G9 as the most common genotype as well as the significant detection of uncommon ones highlight the importance of continuous surveillance of RV genotyping during the post vaccine period. DISCLOSURES: All Authors: No reported disclosures |
format | Online Article Text |
id | pubmed-7777887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77778872021-01-07 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population Koukou, Dimitra Chatzichristou, Panagiota Tatsi, Elizabeth-Barbara Liakopoulou, Theodota Chronopoulou, Genovepha Michos, Athanasios Syriopoulou, Vassiliki Open Forum Infect Dis Poster Abstracts BACKGROUND: Rotavirus (RV) is the leading cause of viral gastroenteritis in children. Although RV genotypes differ geographically and temporally, five are the predominant genotypes circulating worldwide. Aim of our study was to monitor possible changes in distribution of Rotavirus genotypes circulating in Greek pediatric population during the post vaccine era. METHODS: Demographic data and fecal samples were collected from children ≤15 years old with symptoms of acute gastroenteritis who visited emergency units of Pediatric Hospitals in Greece from September 2016 to August 2019. Samples were tested for RV Group A antigen with rapid immunochromatographic assay. Positive samples were further G and P typed employing RT-PCR, semi-nested multiplex PCR and Sanger sequencing of the VP7 and VP4 genes. RESULTS: A total of 660 children participated in the study with median age 31±29 months. Males outnumbered females (59%). Most of them lived in urban cities (85%). RV genotyping distribution was G4P[8] (41%), G1P[8] (22%), G2P[4] (14%), G9P[8] (8%), G9P[4] (5,5%), G12P[8] (2%) and G3P[8] (1,8%). Unusual and mixed genotypes were identified in 3,2% and 2,5% of the samples respectively. During 2016-2017 and 2017-2018, G4P[8] was the predominant genotype in 67% and 51% of the annual samples. However, in 2018-2019 the most common genotypes were G9P[8] and G9P[4] (33% in total) followed by G2P[4] (27%). Interestingly, the genotype G9P[4] was not detected at all in the first two years of the study. CONCLUSION: This study indicates diversity of the predominant RV genotypes in Greek children during 2016-2019. The emergence of G9 as the most common genotype as well as the significant detection of uncommon ones highlight the importance of continuous surveillance of RV genotyping during the post vaccine period. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2020-12-31 /pmc/articles/PMC7777887/ http://dx.doi.org/10.1093/ofid/ofaa439.886 Text en © The Author 2020. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Poster Abstracts Koukou, Dimitra Chatzichristou, Panagiota Tatsi, Elizabeth-Barbara Liakopoulou, Theodota Chronopoulou, Genovepha Michos, Athanasios Syriopoulou, Vassiliki 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population |
title | 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population |
title_full | 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population |
title_fullStr | 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population |
title_full_unstemmed | 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population |
title_short | 694. Unexpected Diversity of Rotavirus Genotypes in Pediatric Population |
title_sort | 694. unexpected diversity of rotavirus genotypes in pediatric population |
topic | Poster Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7777887/ http://dx.doi.org/10.1093/ofid/ofaa439.886 |
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