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On the approximability of the fixed-tree balanced minimum evolution problem
The Fixed-Tree BMEP (FT-BMEP) is a special case of the Balanced Minimum Evolution Problem (BMEP) that consists of finding the assignment of a set of n taxa to the n leaves of a given unrooted binary tree so as to minimize the BMEP objective function. Deciding the computational complexity of the FT-B...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Berlin Heidelberg
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778423/ https://www.ncbi.nlm.nih.gov/pubmed/33425038 http://dx.doi.org/10.1007/s11590-020-01677-x |
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author | Frohn, Martin |
author_facet | Frohn, Martin |
author_sort | Frohn, Martin |
collection | PubMed |
description | The Fixed-Tree BMEP (FT-BMEP) is a special case of the Balanced Minimum Evolution Problem (BMEP) that consists of finding the assignment of a set of n taxa to the n leaves of a given unrooted binary tree so as to minimize the BMEP objective function. Deciding the computational complexity of the FT-BMEP has been an open problem for almost a decade. Here, we show that a few modifications to Fiorini and Joret’s proof of the [Formula: see text] -hardness of the BMEP suffice to prove the general [Formula: see text] -hardness of the FT-BMEP as well as its strong inapproximability. |
format | Online Article Text |
id | pubmed-7778423 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-77784232021-01-04 On the approximability of the fixed-tree balanced minimum evolution problem Frohn, Martin Optim Lett Short Communication The Fixed-Tree BMEP (FT-BMEP) is a special case of the Balanced Minimum Evolution Problem (BMEP) that consists of finding the assignment of a set of n taxa to the n leaves of a given unrooted binary tree so as to minimize the BMEP objective function. Deciding the computational complexity of the FT-BMEP has been an open problem for almost a decade. Here, we show that a few modifications to Fiorini and Joret’s proof of the [Formula: see text] -hardness of the BMEP suffice to prove the general [Formula: see text] -hardness of the FT-BMEP as well as its strong inapproximability. Springer Berlin Heidelberg 2021-01-02 2021 /pmc/articles/PMC7778423/ /pubmed/33425038 http://dx.doi.org/10.1007/s11590-020-01677-x Text en © The Author(s), under exclusive licence to Springer-Verlag GmbH, DE part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Short Communication Frohn, Martin On the approximability of the fixed-tree balanced minimum evolution problem |
title | On the approximability of the fixed-tree balanced minimum evolution problem |
title_full | On the approximability of the fixed-tree balanced minimum evolution problem |
title_fullStr | On the approximability of the fixed-tree balanced minimum evolution problem |
title_full_unstemmed | On the approximability of the fixed-tree balanced minimum evolution problem |
title_short | On the approximability of the fixed-tree balanced minimum evolution problem |
title_sort | on the approximability of the fixed-tree balanced minimum evolution problem |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778423/ https://www.ncbi.nlm.nih.gov/pubmed/33425038 http://dx.doi.org/10.1007/s11590-020-01677-x |
work_keys_str_mv | AT frohnmartin ontheapproximabilityofthefixedtreebalancedminimumevolutionproblem |