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Fully end-to-end deep-learning-based diagnosis of pancreatic tumors

Artificial intelligence can facilitate clinical decision making by considering massive amounts of medical imaging data. Various algorithms have been implemented for different clinical applications. Accurate diagnosis and treatment require reliable and interpretable data. For pancreatic tumor diagnos...

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Autores principales: Si, Ke, Xue, Ying, Yu, Xiazhen, Zhu, Xinpei, Li, Qinghai, Gong, Wei, Liang, Tingbo, Duan, Shumin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778580/
https://www.ncbi.nlm.nih.gov/pubmed/33408793
http://dx.doi.org/10.7150/thno.52508
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author Si, Ke
Xue, Ying
Yu, Xiazhen
Zhu, Xinpei
Li, Qinghai
Gong, Wei
Liang, Tingbo
Duan, Shumin
author_facet Si, Ke
Xue, Ying
Yu, Xiazhen
Zhu, Xinpei
Li, Qinghai
Gong, Wei
Liang, Tingbo
Duan, Shumin
author_sort Si, Ke
collection PubMed
description Artificial intelligence can facilitate clinical decision making by considering massive amounts of medical imaging data. Various algorithms have been implemented for different clinical applications. Accurate diagnosis and treatment require reliable and interpretable data. For pancreatic tumor diagnosis, only 58.5% of images from the First Affiliated Hospital and the Second Affiliated Hospital, Zhejiang University School of Medicine are used, increasing labor and time costs to manually filter out images not directly used by the diagnostic model. Methods: This study used a training dataset of 143,945 dynamic contrast-enhanced CT images of the abdomen from 319 patients. The proposed model contained four stages: image screening, pancreas location, pancreas segmentation, and pancreatic tumor diagnosis. Results: We established a fully end-to-end deep-learning model for diagnosing pancreatic tumors and proposing treatment. The model considers original abdominal CT images without any manual preprocessing. Our artificial-intelligence-based system achieved an area under the curve of 0.871 and a F1 score of 88.5% using an independent testing dataset containing 107,036 clinical CT images from 347 patients. The average accuracy for all tumor types was 82.7%, and the independent accuracies of identifying intraductal papillary mucinous neoplasm and pancreatic ductal adenocarcinoma were 100% and 87.6%, respectively. The average test time per patient was 18.6 s, compared with at least 8 min for manual reviewing. Furthermore, the model provided a transparent and interpretable diagnosis by producing saliency maps highlighting the regions relevant to its decision. Conclusions: The proposed model can potentially deliver efficient and accurate preoperative diagnoses that could aid the surgical management of pancreatic tumor.
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spelling pubmed-77785802021-01-05 Fully end-to-end deep-learning-based diagnosis of pancreatic tumors Si, Ke Xue, Ying Yu, Xiazhen Zhu, Xinpei Li, Qinghai Gong, Wei Liang, Tingbo Duan, Shumin Theranostics Research Paper Artificial intelligence can facilitate clinical decision making by considering massive amounts of medical imaging data. Various algorithms have been implemented for different clinical applications. Accurate diagnosis and treatment require reliable and interpretable data. For pancreatic tumor diagnosis, only 58.5% of images from the First Affiliated Hospital and the Second Affiliated Hospital, Zhejiang University School of Medicine are used, increasing labor and time costs to manually filter out images not directly used by the diagnostic model. Methods: This study used a training dataset of 143,945 dynamic contrast-enhanced CT images of the abdomen from 319 patients. The proposed model contained four stages: image screening, pancreas location, pancreas segmentation, and pancreatic tumor diagnosis. Results: We established a fully end-to-end deep-learning model for diagnosing pancreatic tumors and proposing treatment. The model considers original abdominal CT images without any manual preprocessing. Our artificial-intelligence-based system achieved an area under the curve of 0.871 and a F1 score of 88.5% using an independent testing dataset containing 107,036 clinical CT images from 347 patients. The average accuracy for all tumor types was 82.7%, and the independent accuracies of identifying intraductal papillary mucinous neoplasm and pancreatic ductal adenocarcinoma were 100% and 87.6%, respectively. The average test time per patient was 18.6 s, compared with at least 8 min for manual reviewing. Furthermore, the model provided a transparent and interpretable diagnosis by producing saliency maps highlighting the regions relevant to its decision. Conclusions: The proposed model can potentially deliver efficient and accurate preoperative diagnoses that could aid the surgical management of pancreatic tumor. Ivyspring International Publisher 2021-01-01 /pmc/articles/PMC7778580/ /pubmed/33408793 http://dx.doi.org/10.7150/thno.52508 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Si, Ke
Xue, Ying
Yu, Xiazhen
Zhu, Xinpei
Li, Qinghai
Gong, Wei
Liang, Tingbo
Duan, Shumin
Fully end-to-end deep-learning-based diagnosis of pancreatic tumors
title Fully end-to-end deep-learning-based diagnosis of pancreatic tumors
title_full Fully end-to-end deep-learning-based diagnosis of pancreatic tumors
title_fullStr Fully end-to-end deep-learning-based diagnosis of pancreatic tumors
title_full_unstemmed Fully end-to-end deep-learning-based diagnosis of pancreatic tumors
title_short Fully end-to-end deep-learning-based diagnosis of pancreatic tumors
title_sort fully end-to-end deep-learning-based diagnosis of pancreatic tumors
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778580/
https://www.ncbi.nlm.nih.gov/pubmed/33408793
http://dx.doi.org/10.7150/thno.52508
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