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HMPDACC: a Human Microbiome Project Multi-omic data resource

The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated ho...

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Autores principales: Creasy, Heather Huot, Felix, Victor, Aluvathingal, Jain, Crabtree, Jonathan, Ifeonu, Olukemi, Matsumura, James, McCracken, Carrie, Nickel, Lance, Orvis, Joshua, Schor, Mike, Giglio, Michelle, Mahurkar, Anup, White, Owen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778886/
https://www.ncbi.nlm.nih.gov/pubmed/33305317
http://dx.doi.org/10.1093/nar/gkaa996
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author Creasy, Heather Huot
Felix, Victor
Aluvathingal, Jain
Crabtree, Jonathan
Ifeonu, Olukemi
Matsumura, James
McCracken, Carrie
Nickel, Lance
Orvis, Joshua
Schor, Mike
Giglio, Michelle
Mahurkar, Anup
White, Owen
author_facet Creasy, Heather Huot
Felix, Victor
Aluvathingal, Jain
Crabtree, Jonathan
Ifeonu, Olukemi
Matsumura, James
McCracken, Carrie
Nickel, Lance
Orvis, Joshua
Schor, Mike
Giglio, Michelle
Mahurkar, Anup
White, Owen
author_sort Creasy, Heather Huot
collection PubMed
description The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated hosts. The Human Microbiome Project Data Coordination Center (HMPDACC) was established to provide a portal to access data and resources produced by the HMP. The HMPDACC provides a unified data repository, multi-faceted search functionality, analysis pipelines and standardized protocols to facilitate community use of HMP data. Recent efforts have been put toward making HMP data more findable, accessible, interoperable and reusable. HMPDACC resources are freely available at www.hmpdacc.org.
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spelling pubmed-77788862021-01-06 HMPDACC: a Human Microbiome Project Multi-omic data resource Creasy, Heather Huot Felix, Victor Aluvathingal, Jain Crabtree, Jonathan Ifeonu, Olukemi Matsumura, James McCracken, Carrie Nickel, Lance Orvis, Joshua Schor, Mike Giglio, Michelle Mahurkar, Anup White, Owen Nucleic Acids Res Database Issue The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated hosts. The Human Microbiome Project Data Coordination Center (HMPDACC) was established to provide a portal to access data and resources produced by the HMP. The HMPDACC provides a unified data repository, multi-faceted search functionality, analysis pipelines and standardized protocols to facilitate community use of HMP data. Recent efforts have been put toward making HMP data more findable, accessible, interoperable and reusable. HMPDACC resources are freely available at www.hmpdacc.org. Oxford University Press 2020-12-10 /pmc/articles/PMC7778886/ /pubmed/33305317 http://dx.doi.org/10.1093/nar/gkaa996 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Creasy, Heather Huot
Felix, Victor
Aluvathingal, Jain
Crabtree, Jonathan
Ifeonu, Olukemi
Matsumura, James
McCracken, Carrie
Nickel, Lance
Orvis, Joshua
Schor, Mike
Giglio, Michelle
Mahurkar, Anup
White, Owen
HMPDACC: a Human Microbiome Project Multi-omic data resource
title HMPDACC: a Human Microbiome Project Multi-omic data resource
title_full HMPDACC: a Human Microbiome Project Multi-omic data resource
title_fullStr HMPDACC: a Human Microbiome Project Multi-omic data resource
title_full_unstemmed HMPDACC: a Human Microbiome Project Multi-omic data resource
title_short HMPDACC: a Human Microbiome Project Multi-omic data resource
title_sort hmpdacc: a human microbiome project multi-omic data resource
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778886/
https://www.ncbi.nlm.nih.gov/pubmed/33305317
http://dx.doi.org/10.1093/nar/gkaa996
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