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HMPDACC: a Human Microbiome Project Multi-omic data resource
The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated ho...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778886/ https://www.ncbi.nlm.nih.gov/pubmed/33305317 http://dx.doi.org/10.1093/nar/gkaa996 |
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author | Creasy, Heather Huot Felix, Victor Aluvathingal, Jain Crabtree, Jonathan Ifeonu, Olukemi Matsumura, James McCracken, Carrie Nickel, Lance Orvis, Joshua Schor, Mike Giglio, Michelle Mahurkar, Anup White, Owen |
author_facet | Creasy, Heather Huot Felix, Victor Aluvathingal, Jain Crabtree, Jonathan Ifeonu, Olukemi Matsumura, James McCracken, Carrie Nickel, Lance Orvis, Joshua Schor, Mike Giglio, Michelle Mahurkar, Anup White, Owen |
author_sort | Creasy, Heather Huot |
collection | PubMed |
description | The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated hosts. The Human Microbiome Project Data Coordination Center (HMPDACC) was established to provide a portal to access data and resources produced by the HMP. The HMPDACC provides a unified data repository, multi-faceted search functionality, analysis pipelines and standardized protocols to facilitate community use of HMP data. Recent efforts have been put toward making HMP data more findable, accessible, interoperable and reusable. HMPDACC resources are freely available at www.hmpdacc.org. |
format | Online Article Text |
id | pubmed-7778886 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77788862021-01-06 HMPDACC: a Human Microbiome Project Multi-omic data resource Creasy, Heather Huot Felix, Victor Aluvathingal, Jain Crabtree, Jonathan Ifeonu, Olukemi Matsumura, James McCracken, Carrie Nickel, Lance Orvis, Joshua Schor, Mike Giglio, Michelle Mahurkar, Anup White, Owen Nucleic Acids Res Database Issue The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated hosts. The Human Microbiome Project Data Coordination Center (HMPDACC) was established to provide a portal to access data and resources produced by the HMP. The HMPDACC provides a unified data repository, multi-faceted search functionality, analysis pipelines and standardized protocols to facilitate community use of HMP data. Recent efforts have been put toward making HMP data more findable, accessible, interoperable and reusable. HMPDACC resources are freely available at www.hmpdacc.org. Oxford University Press 2020-12-10 /pmc/articles/PMC7778886/ /pubmed/33305317 http://dx.doi.org/10.1093/nar/gkaa996 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Creasy, Heather Huot Felix, Victor Aluvathingal, Jain Crabtree, Jonathan Ifeonu, Olukemi Matsumura, James McCracken, Carrie Nickel, Lance Orvis, Joshua Schor, Mike Giglio, Michelle Mahurkar, Anup White, Owen HMPDACC: a Human Microbiome Project Multi-omic data resource |
title | HMPDACC: a Human Microbiome Project Multi-omic data resource |
title_full | HMPDACC: a Human Microbiome Project Multi-omic data resource |
title_fullStr | HMPDACC: a Human Microbiome Project Multi-omic data resource |
title_full_unstemmed | HMPDACC: a Human Microbiome Project Multi-omic data resource |
title_short | HMPDACC: a Human Microbiome Project Multi-omic data resource |
title_sort | hmpdacc: a human microbiome project multi-omic data resource |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778886/ https://www.ncbi.nlm.nih.gov/pubmed/33305317 http://dx.doi.org/10.1093/nar/gkaa996 |
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