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FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) provides a suite of online resources that facilitate functional genomics studies with a special emphasis on Drosophila melanogaster. Currently, the database provides: gene-centric resources that faci...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778949/ https://www.ncbi.nlm.nih.gov/pubmed/33104800 http://dx.doi.org/10.1093/nar/gkaa936 |
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author | Hu, Yanhui Comjean, Aram Rodiger, Jonathan Liu, Yifang Gao, Yue Chung, Verena Zirin, Jonathan Perrimon, Norbert Mohr, Stephanie E |
author_facet | Hu, Yanhui Comjean, Aram Rodiger, Jonathan Liu, Yifang Gao, Yue Chung, Verena Zirin, Jonathan Perrimon, Norbert Mohr, Stephanie E |
author_sort | Hu, Yanhui |
collection | PubMed |
description | The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) provides a suite of online resources that facilitate functional genomics studies with a special emphasis on Drosophila melanogaster. Currently, the database provides: gene-centric resources that facilitate ortholog mapping and mining of information about orthologs in common genetic model species; reagent-centric resources that help researchers identify RNAi and CRISPR sgRNA reagents or designs; and data-centric resources that facilitate visualization and mining of transcriptomics data, protein modification data, protein interactions, and more. Here, we discuss updated and new features that help biological and biomedical researchers efficiently identify, visualize, analyze, and integrate information and data for Drosophila and other species. Together, these resources facilitate multiple steps in functional genomics workflows, from building gene and reagent lists to management, analysis, and integration of data. |
format | Online Article Text |
id | pubmed-7778949 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77789492021-01-06 FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update Hu, Yanhui Comjean, Aram Rodiger, Jonathan Liu, Yifang Gao, Yue Chung, Verena Zirin, Jonathan Perrimon, Norbert Mohr, Stephanie E Nucleic Acids Res Database Issue The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) provides a suite of online resources that facilitate functional genomics studies with a special emphasis on Drosophila melanogaster. Currently, the database provides: gene-centric resources that facilitate ortholog mapping and mining of information about orthologs in common genetic model species; reagent-centric resources that help researchers identify RNAi and CRISPR sgRNA reagents or designs; and data-centric resources that facilitate visualization and mining of transcriptomics data, protein modification data, protein interactions, and more. Here, we discuss updated and new features that help biological and biomedical researchers efficiently identify, visualize, analyze, and integrate information and data for Drosophila and other species. Together, these resources facilitate multiple steps in functional genomics workflows, from building gene and reagent lists to management, analysis, and integration of data. Oxford University Press 2020-10-26 /pmc/articles/PMC7778949/ /pubmed/33104800 http://dx.doi.org/10.1093/nar/gkaa936 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Hu, Yanhui Comjean, Aram Rodiger, Jonathan Liu, Yifang Gao, Yue Chung, Verena Zirin, Jonathan Perrimon, Norbert Mohr, Stephanie E FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update |
title | FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update |
title_full | FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update |
title_fullStr | FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update |
title_full_unstemmed | FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update |
title_short | FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update |
title_sort | flyrnai.org—the database of the drosophila rnai screening center and transgenic rnai project: 2021 update |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778949/ https://www.ncbi.nlm.nih.gov/pubmed/33104800 http://dx.doi.org/10.1093/nar/gkaa936 |
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