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FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update

The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) provides a suite of online resources that facilitate functional genomics studies with a special emphasis on Drosophila melanogaster. Currently, the database provides: gene-centric resources that faci...

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Autores principales: Hu, Yanhui, Comjean, Aram, Rodiger, Jonathan, Liu, Yifang, Gao, Yue, Chung, Verena, Zirin, Jonathan, Perrimon, Norbert, Mohr, Stephanie E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778949/
https://www.ncbi.nlm.nih.gov/pubmed/33104800
http://dx.doi.org/10.1093/nar/gkaa936
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author Hu, Yanhui
Comjean, Aram
Rodiger, Jonathan
Liu, Yifang
Gao, Yue
Chung, Verena
Zirin, Jonathan
Perrimon, Norbert
Mohr, Stephanie E
author_facet Hu, Yanhui
Comjean, Aram
Rodiger, Jonathan
Liu, Yifang
Gao, Yue
Chung, Verena
Zirin, Jonathan
Perrimon, Norbert
Mohr, Stephanie E
author_sort Hu, Yanhui
collection PubMed
description The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) provides a suite of online resources that facilitate functional genomics studies with a special emphasis on Drosophila melanogaster. Currently, the database provides: gene-centric resources that facilitate ortholog mapping and mining of information about orthologs in common genetic model species; reagent-centric resources that help researchers identify RNAi and CRISPR sgRNA reagents or designs; and data-centric resources that facilitate visualization and mining of transcriptomics data, protein modification data, protein interactions, and more. Here, we discuss updated and new features that help biological and biomedical researchers efficiently identify, visualize, analyze, and integrate information and data for Drosophila and other species. Together, these resources facilitate multiple steps in functional genomics workflows, from building gene and reagent lists to management, analysis, and integration of data.
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spelling pubmed-77789492021-01-06 FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update Hu, Yanhui Comjean, Aram Rodiger, Jonathan Liu, Yifang Gao, Yue Chung, Verena Zirin, Jonathan Perrimon, Norbert Mohr, Stephanie E Nucleic Acids Res Database Issue The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) provides a suite of online resources that facilitate functional genomics studies with a special emphasis on Drosophila melanogaster. Currently, the database provides: gene-centric resources that facilitate ortholog mapping and mining of information about orthologs in common genetic model species; reagent-centric resources that help researchers identify RNAi and CRISPR sgRNA reagents or designs; and data-centric resources that facilitate visualization and mining of transcriptomics data, protein modification data, protein interactions, and more. Here, we discuss updated and new features that help biological and biomedical researchers efficiently identify, visualize, analyze, and integrate information and data for Drosophila and other species. Together, these resources facilitate multiple steps in functional genomics workflows, from building gene and reagent lists to management, analysis, and integration of data. Oxford University Press 2020-10-26 /pmc/articles/PMC7778949/ /pubmed/33104800 http://dx.doi.org/10.1093/nar/gkaa936 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Hu, Yanhui
Comjean, Aram
Rodiger, Jonathan
Liu, Yifang
Gao, Yue
Chung, Verena
Zirin, Jonathan
Perrimon, Norbert
Mohr, Stephanie E
FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
title FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
title_full FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
title_fullStr FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
title_full_unstemmed FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
title_short FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update
title_sort flyrnai.org—the database of the drosophila rnai screening center and transgenic rnai project: 2021 update
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778949/
https://www.ncbi.nlm.nih.gov/pubmed/33104800
http://dx.doi.org/10.1093/nar/gkaa936
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