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KLIFS: an overhaul after the first 5 years of supporting kinase research

Kinases are a prime target of drug development efforts with >60 drug approvals in the past two decades. Due to the research into this protein family, a wealth of data has been accumulated that keeps on growing. KLIFS—Kinase–Ligand Interaction Fingerprints and Structures—is a structural database f...

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Autores principales: Kanev, Georgi K, de Graaf, Chris, Westerman, Bart A, de Esch, Iwan J P, Kooistra, Albert J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778968/
https://www.ncbi.nlm.nih.gov/pubmed/33084889
http://dx.doi.org/10.1093/nar/gkaa895
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author Kanev, Georgi K
de Graaf, Chris
Westerman, Bart A
de Esch, Iwan J P
Kooistra, Albert J
author_facet Kanev, Georgi K
de Graaf, Chris
Westerman, Bart A
de Esch, Iwan J P
Kooistra, Albert J
author_sort Kanev, Georgi K
collection PubMed
description Kinases are a prime target of drug development efforts with >60 drug approvals in the past two decades. Due to the research into this protein family, a wealth of data has been accumulated that keeps on growing. KLIFS—Kinase–Ligand Interaction Fingerprints and Structures—is a structural database focusing on how kinase inhibitors interact with their targets. The aim of KLIFS is to support (structure-based) kinase research through the systematic collection, annotation, and processing of kinase structures. Now, 5 years after releasing the initial KLIFS website, the database has undergone a complete overhaul with a new website, new logo, and new functionalities. In this article, we start by looking back at how KLIFS has been used by the research community, followed by a description of the renewed KLIFS, and conclude with showcasing the functionalities of KLIFS. Major changes include the integration of approved drugs and inhibitors in clinical trials, extension of the coverage to atypical kinases, and a RESTful API for programmatic access. KLIFS is available at the new domain https://klifs.net.
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spelling pubmed-77789682021-01-06 KLIFS: an overhaul after the first 5 years of supporting kinase research Kanev, Georgi K de Graaf, Chris Westerman, Bart A de Esch, Iwan J P Kooistra, Albert J Nucleic Acids Res Database Issue Kinases are a prime target of drug development efforts with >60 drug approvals in the past two decades. Due to the research into this protein family, a wealth of data has been accumulated that keeps on growing. KLIFS—Kinase–Ligand Interaction Fingerprints and Structures—is a structural database focusing on how kinase inhibitors interact with their targets. The aim of KLIFS is to support (structure-based) kinase research through the systematic collection, annotation, and processing of kinase structures. Now, 5 years after releasing the initial KLIFS website, the database has undergone a complete overhaul with a new website, new logo, and new functionalities. In this article, we start by looking back at how KLIFS has been used by the research community, followed by a description of the renewed KLIFS, and conclude with showcasing the functionalities of KLIFS. Major changes include the integration of approved drugs and inhibitors in clinical trials, extension of the coverage to atypical kinases, and a RESTful API for programmatic access. KLIFS is available at the new domain https://klifs.net. Oxford University Press 2020-10-21 /pmc/articles/PMC7778968/ /pubmed/33084889 http://dx.doi.org/10.1093/nar/gkaa895 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Kanev, Georgi K
de Graaf, Chris
Westerman, Bart A
de Esch, Iwan J P
Kooistra, Albert J
KLIFS: an overhaul after the first 5 years of supporting kinase research
title KLIFS: an overhaul after the first 5 years of supporting kinase research
title_full KLIFS: an overhaul after the first 5 years of supporting kinase research
title_fullStr KLIFS: an overhaul after the first 5 years of supporting kinase research
title_full_unstemmed KLIFS: an overhaul after the first 5 years of supporting kinase research
title_short KLIFS: an overhaul after the first 5 years of supporting kinase research
title_sort klifs: an overhaul after the first 5 years of supporting kinase research
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778968/
https://www.ncbi.nlm.nih.gov/pubmed/33084889
http://dx.doi.org/10.1093/nar/gkaa895
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