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PhycoCosm, a comparative algal genomics resource
Algae are a diverse, polyphyletic group of photosynthetic eukaryotes spanning nearly all eukaryotic lineages of life and collectively responsible for ∼50% of photosynthesis on Earth. Sequenced algal genomes, critical to understanding their complex biology, are growing in number and require efficient...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779022/ https://www.ncbi.nlm.nih.gov/pubmed/33104790 http://dx.doi.org/10.1093/nar/gkaa898 |
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author | Grigoriev, Igor V Hayes, Richard D Calhoun, Sara Kamel, Bishoy Wang, Alice Ahrendt, Steven Dusheyko, Sergey Nikitin, Roman Mondo, Stephen J Salamov, Asaf Shabalov, Igor Kuo, Alan |
author_facet | Grigoriev, Igor V Hayes, Richard D Calhoun, Sara Kamel, Bishoy Wang, Alice Ahrendt, Steven Dusheyko, Sergey Nikitin, Roman Mondo, Stephen J Salamov, Asaf Shabalov, Igor Kuo, Alan |
author_sort | Grigoriev, Igor V |
collection | PubMed |
description | Algae are a diverse, polyphyletic group of photosynthetic eukaryotes spanning nearly all eukaryotic lineages of life and collectively responsible for ∼50% of photosynthesis on Earth. Sequenced algal genomes, critical to understanding their complex biology, are growing in number and require efficient tools for analysis. PhycoCosm (https://phycocosm.jgi.doe.gov) is an algal multi-omics portal, developed by the US Department of Energy Joint Genome Institute to support analysis and distribution of algal genome sequences and other ‘omics’ data. PhycoCosm provides integration of genome sequence and annotation for >100 algal genomes with available multi-omics data and interactive web-based tools to enable algal research in bioenergy and the environment, encouraging community engagement and data exchange, and fostering new sequencing projects that will further these research goals. |
format | Online Article Text |
id | pubmed-7779022 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77790222021-01-07 PhycoCosm, a comparative algal genomics resource Grigoriev, Igor V Hayes, Richard D Calhoun, Sara Kamel, Bishoy Wang, Alice Ahrendt, Steven Dusheyko, Sergey Nikitin, Roman Mondo, Stephen J Salamov, Asaf Shabalov, Igor Kuo, Alan Nucleic Acids Res Database Issue Algae are a diverse, polyphyletic group of photosynthetic eukaryotes spanning nearly all eukaryotic lineages of life and collectively responsible for ∼50% of photosynthesis on Earth. Sequenced algal genomes, critical to understanding their complex biology, are growing in number and require efficient tools for analysis. PhycoCosm (https://phycocosm.jgi.doe.gov) is an algal multi-omics portal, developed by the US Department of Energy Joint Genome Institute to support analysis and distribution of algal genome sequences and other ‘omics’ data. PhycoCosm provides integration of genome sequence and annotation for >100 algal genomes with available multi-omics data and interactive web-based tools to enable algal research in bioenergy and the environment, encouraging community engagement and data exchange, and fostering new sequencing projects that will further these research goals. Oxford University Press 2020-10-26 /pmc/articles/PMC7779022/ /pubmed/33104790 http://dx.doi.org/10.1093/nar/gkaa898 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Grigoriev, Igor V Hayes, Richard D Calhoun, Sara Kamel, Bishoy Wang, Alice Ahrendt, Steven Dusheyko, Sergey Nikitin, Roman Mondo, Stephen J Salamov, Asaf Shabalov, Igor Kuo, Alan PhycoCosm, a comparative algal genomics resource |
title | PhycoCosm, a comparative algal genomics resource |
title_full | PhycoCosm, a comparative algal genomics resource |
title_fullStr | PhycoCosm, a comparative algal genomics resource |
title_full_unstemmed | PhycoCosm, a comparative algal genomics resource |
title_short | PhycoCosm, a comparative algal genomics resource |
title_sort | phycocosm, a comparative algal genomics resource |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779022/ https://www.ncbi.nlm.nih.gov/pubmed/33104790 http://dx.doi.org/10.1093/nar/gkaa898 |
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