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FlyBase: updates to the Drosophila melanogaster knowledge base
FlyBase (flybase.org) is an essential online database for researchers using Drosophila melanogaster as a model organism, facilitating access to a diverse array of information that includes genetic, molecular, genomic and reagent resources. Here, we describe the introduction of several new features a...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779046/ https://www.ncbi.nlm.nih.gov/pubmed/33219682 http://dx.doi.org/10.1093/nar/gkaa1026 |
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author | Larkin, Aoife Marygold, Steven J Antonazzo, Giulia Attrill, Helen dos Santos, Gilberto Garapati, Phani V Goodman, Joshua L Gramates, L Sian Millburn, Gillian Strelets, Victor B Tabone, Christopher J Thurmond, Jim |
author_facet | Larkin, Aoife Marygold, Steven J Antonazzo, Giulia Attrill, Helen dos Santos, Gilberto Garapati, Phani V Goodman, Joshua L Gramates, L Sian Millburn, Gillian Strelets, Victor B Tabone, Christopher J Thurmond, Jim |
author_sort | Larkin, Aoife |
collection | PubMed |
description | FlyBase (flybase.org) is an essential online database for researchers using Drosophila melanogaster as a model organism, facilitating access to a diverse array of information that includes genetic, molecular, genomic and reagent resources. Here, we describe the introduction of several new features at FlyBase, including Pathway Reports, paralog information, disease models based on orthology, customizable tables within reports and overview displays (‘ribbons’) of expression and disease data. We also describe a variety of recent important updates, including incorporation of a developmental proteome, upgrades to the GAL4 search tab, additional Experimental Tool Reports, migration to JBrowse for genome browsing and improvements to batch queries/downloads and the Fast-Track Your Paper tool. |
format | Online Article Text |
id | pubmed-7779046 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77790462021-01-07 FlyBase: updates to the Drosophila melanogaster knowledge base Larkin, Aoife Marygold, Steven J Antonazzo, Giulia Attrill, Helen dos Santos, Gilberto Garapati, Phani V Goodman, Joshua L Gramates, L Sian Millburn, Gillian Strelets, Victor B Tabone, Christopher J Thurmond, Jim Nucleic Acids Res Database Issue FlyBase (flybase.org) is an essential online database for researchers using Drosophila melanogaster as a model organism, facilitating access to a diverse array of information that includes genetic, molecular, genomic and reagent resources. Here, we describe the introduction of several new features at FlyBase, including Pathway Reports, paralog information, disease models based on orthology, customizable tables within reports and overview displays (‘ribbons’) of expression and disease data. We also describe a variety of recent important updates, including incorporation of a developmental proteome, upgrades to the GAL4 search tab, additional Experimental Tool Reports, migration to JBrowse for genome browsing and improvements to batch queries/downloads and the Fast-Track Your Paper tool. Oxford University Press 2020-11-21 /pmc/articles/PMC7779046/ /pubmed/33219682 http://dx.doi.org/10.1093/nar/gkaa1026 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Larkin, Aoife Marygold, Steven J Antonazzo, Giulia Attrill, Helen dos Santos, Gilberto Garapati, Phani V Goodman, Joshua L Gramates, L Sian Millburn, Gillian Strelets, Victor B Tabone, Christopher J Thurmond, Jim FlyBase: updates to the Drosophila melanogaster knowledge base |
title | FlyBase: updates to the Drosophila melanogaster knowledge base |
title_full | FlyBase: updates to the Drosophila melanogaster knowledge base |
title_fullStr | FlyBase: updates to the Drosophila melanogaster knowledge base |
title_full_unstemmed | FlyBase: updates to the Drosophila melanogaster knowledge base |
title_short | FlyBase: updates to the Drosophila melanogaster knowledge base |
title_sort | flybase: updates to the drosophila melanogaster knowledge base |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779046/ https://www.ncbi.nlm.nih.gov/pubmed/33219682 http://dx.doi.org/10.1093/nar/gkaa1026 |
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