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MASI: microbiota—active substance interactions database
Xenobiotic and host active substances interact with gut microbiota to influence human health and therapeutics. Dietary, pharmaceutical, herbal and environmental substances are modified by microbiota with altered bioavailabilities, bioactivities and toxic effects. Xenobiotics also affect microbiota w...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779062/ https://www.ncbi.nlm.nih.gov/pubmed/33125077 http://dx.doi.org/10.1093/nar/gkaa924 |
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author | Zeng, Xian Yang, Xue Fan, Jiajun Tan, Ying Ju, Lingyi Shen, Wanxiang Wang, Yali Wang, Xinghao Chen, Weiping Ju, Dianwen Chen, Yu Zong |
author_facet | Zeng, Xian Yang, Xue Fan, Jiajun Tan, Ying Ju, Lingyi Shen, Wanxiang Wang, Yali Wang, Xinghao Chen, Weiping Ju, Dianwen Chen, Yu Zong |
author_sort | Zeng, Xian |
collection | PubMed |
description | Xenobiotic and host active substances interact with gut microbiota to influence human health and therapeutics. Dietary, pharmaceutical, herbal and environmental substances are modified by microbiota with altered bioavailabilities, bioactivities and toxic effects. Xenobiotics also affect microbiota with health implications. Knowledge of these microbiota and active substance interactions is important for understanding microbiota-regulated functions and therapeutics. Established microbiota databases provide useful information about the microbiota-disease associations, diet and drug interventions, and microbiota modulation of drugs. However, there is insufficient information on the active substances modified by microbiota and the abundance of gut bacteria in humans. Only ∼7% drugs are covered by the established databases. To complement these databases, we developed MASI, Microbiota—Active Substance Interactions database, for providing the information about the microbiota alteration of various substances, substance alteration of microbiota, and the abundance of gut bacteria in humans. These include 1,051 pharmaceutical, 103 dietary, 119 herbal, 46 probiotic, 142 environmental substances interacting with 806 microbiota species linked to 56 diseases and 784 microbiota–disease associations. MASI covers 11 215 bacteria-pharmaceutical, 914 bacteria-herbal, 309 bacteria-dietary, 753 bacteria-environmental substance interactions and the abundance profiles of 259 bacteria species in 3465 patients and 5334 healthy individuals. MASI is freely accessible at http://www.aiddlab.com/MASI. |
format | Online Article Text |
id | pubmed-7779062 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77790622021-01-07 MASI: microbiota—active substance interactions database Zeng, Xian Yang, Xue Fan, Jiajun Tan, Ying Ju, Lingyi Shen, Wanxiang Wang, Yali Wang, Xinghao Chen, Weiping Ju, Dianwen Chen, Yu Zong Nucleic Acids Res Database Issue Xenobiotic and host active substances interact with gut microbiota to influence human health and therapeutics. Dietary, pharmaceutical, herbal and environmental substances are modified by microbiota with altered bioavailabilities, bioactivities and toxic effects. Xenobiotics also affect microbiota with health implications. Knowledge of these microbiota and active substance interactions is important for understanding microbiota-regulated functions and therapeutics. Established microbiota databases provide useful information about the microbiota-disease associations, diet and drug interventions, and microbiota modulation of drugs. However, there is insufficient information on the active substances modified by microbiota and the abundance of gut bacteria in humans. Only ∼7% drugs are covered by the established databases. To complement these databases, we developed MASI, Microbiota—Active Substance Interactions database, for providing the information about the microbiota alteration of various substances, substance alteration of microbiota, and the abundance of gut bacteria in humans. These include 1,051 pharmaceutical, 103 dietary, 119 herbal, 46 probiotic, 142 environmental substances interacting with 806 microbiota species linked to 56 diseases and 784 microbiota–disease associations. MASI covers 11 215 bacteria-pharmaceutical, 914 bacteria-herbal, 309 bacteria-dietary, 753 bacteria-environmental substance interactions and the abundance profiles of 259 bacteria species in 3465 patients and 5334 healthy individuals. MASI is freely accessible at http://www.aiddlab.com/MASI. Oxford University Press 2020-10-30 /pmc/articles/PMC7779062/ /pubmed/33125077 http://dx.doi.org/10.1093/nar/gkaa924 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Zeng, Xian Yang, Xue Fan, Jiajun Tan, Ying Ju, Lingyi Shen, Wanxiang Wang, Yali Wang, Xinghao Chen, Weiping Ju, Dianwen Chen, Yu Zong MASI: microbiota—active substance interactions database |
title | MASI: microbiota—active substance interactions database |
title_full | MASI: microbiota—active substance interactions database |
title_fullStr | MASI: microbiota—active substance interactions database |
title_full_unstemmed | MASI: microbiota—active substance interactions database |
title_short | MASI: microbiota—active substance interactions database |
title_sort | masi: microbiota—active substance interactions database |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779062/ https://www.ncbi.nlm.nih.gov/pubmed/33125077 http://dx.doi.org/10.1093/nar/gkaa924 |
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