Cargando…

Datanator: an integrated database of molecular data for quantitatively modeling cellular behavior

Integrative research about multiple biochemical subsystems has significant potential to help advance biology, bioengineering and medicine. However, it is difficult to obtain the diverse data needed for integrative research. To facilitate biochemical research, we developed Datanator (https://datanato...

Descripción completa

Detalles Bibliográficos
Autores principales:	Roth, Yosef D, Lian, Zhouyang, Pochiraju, Saahith, Shaikh, Bilal, Karr, Jonathan R
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2020
Materias:	Database Issue
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779073/ https://www.ncbi.nlm.nih.gov/pubmed/33174603 http://dx.doi.org/10.1093/nar/gkaa1008

Ejemplares similares

qPTMplants: an integrative database of quantitative post-translational modifications in plants
por: Xue, Han, et al.
Publicado: (2021)

AntiJen: a quantitative immunology database integrating functional, thermodynamic, kinetic, biophysical, and cellular data
por: Toseland, Christopher P, et al.
Publicado: (2005)

INDI—integrated nanobody database for immunoinformatics
por: Deszyński, Piotr, et al.
Publicado: (2021)

NPASS database update 2023: quantitative natural product activity and species source database for biomedical research
por: Zhao, Hui, et al.
Publicado: (2022)

KEGG: integrating viruses and cellular organisms
por: Kanehisa, Minoru, et al.
Publicado: (2020)

iCSDB: an integrated database of CRISPR screens
por: Choi, Ahyoung, et al.
Publicado: (2020)

ViruSurf: an integrated database to investigate viral sequences
por: Canakoglu, Arif, et al.
Publicado: (2020)

The MemMoRF database for recognizing disordered protein regions interacting with cellular membranes
por: Csizmadia, Georgina, et al.
Publicado: (2020)

Integration of the Drug–Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts
por: Freshour, Sharon L, et al.
Publicado: (2020)

QTLbase: an integrative resource for quantitative trait loci across multiple human molecular phenotypes
por: Zheng, Zhanye, et al.
Publicado: (2020)

Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice
por: Bogue, Molly A, et al.
Publicado: (2018)

Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine
por: Elsik, Christine G., et al.
Publicado: (2016)

SSRome: an integrated database and pipelines for exploring microsatellites in all organisms
por: Mokhtar, Morad M, et al.
Publicado: (2019)

The jPOST environment: an integrated proteomics data repository and database
por: Moriya, Yuki, et al.
Publicado: (2019)

HGD: an integrated homologous gene database across multiple species
por: Duan, Guangya, et al.
Publicado: (2022)

CREAMMIST: an integrative probabilistic database for cancer drug response prediction
por: Yingtaweesittikul, Hatairat, et al.
Publicado: (2022)

ComPPI: a cellular compartment-specific database for protein–protein interaction network analysis
por: Veres, Daniel V., et al.
Publicado: (2015)

Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data
por: Koleti, Amar, et al.
Publicado: (2018)

ConjuPepDB: a database of peptide–drug conjugates
por: Balogh, Balázs, et al.
Publicado: (2020)

Influenza Research Database: An integrated bioinformatics resource for influenza virus research
por: Zhang, Yun, et al.
Publicado: (2017)

The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
por: Cooper, Laurel, et al.
Publicado: (2018)

ICEberg 2.0: an updated database of bacterial integrative and conjugative elements
por: Liu, Meng, et al.
Publicado: (2019)

NPInter v4.0: an integrated database of ncRNA interactions
por: Teng, Xueyi, et al.
Publicado: (2020)

CSCD2: an integrated interactional database of cancer-specific circular RNAs
por: Feng, Jing, et al.
Publicado: (2021)

FoldamerDB: a database of peptidic foldamers
por: Nizami, Bilal, et al.
Publicado: (2020)

SubtiWiki 2.0—an integrated database for the model organism Bacillus subtilis
por: Michna, Raphael H., et al.
Publicado: (2016)

Integrated interactions database: tissue-specific view of the human and model organism interactomes
por: Kotlyar, Max, et al.
Publicado: (2016)

PharmacoDB: an integrative database for mining in vitro anticancer drug screening studies
por: Smirnov, Petr, et al.
Publicado: (2018)

VarCards: an integrated genetic and clinical database for coding variants in the human genome
por: Li, Jinchen, et al.
Publicado: (2018)

SymMap: an integrative database of traditional Chinese medicine enhanced by symptom mapping
por: Wu, Yang, et al.
Publicado: (2019)

VISDB: a manually curated database of viral integration sites in the human genome
por: Tang, Deyou, et al.
Publicado: (2020)

OncoVar: an integrated database and analysis platform for oncogenic driver variants in cancers
por: Wang, Tao, et al.
Publicado: (2020)

DISCO: a database of Deeply Integrated human Single-Cell Omics data
por: Li, Mengwei, et al.
Publicado: (2021)

CyanoOmicsDB: an integrated omics database for functional genomic analysis of cyanobacteria
por: Zhou, Peng, et al.
Publicado: (2021)

The 2016 database issue of Nucleic Acids Research and an updated molecular biology database collection
por: Rigden, Daniel J., et al.
Publicado: (2016)

The 2018 Nucleic Acids Research database issue and the online molecular biology database collection
por: Rigden, Daniel J, et al.
Publicado: (2018)

The TissueNet v.2 database: A quantitative view of protein-protein interactions across human tissues
por: Basha, Omer, et al.
Publicado: (2017)

Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants
por: Petryszak, Robert, et al.
Publicado: (2016)

mirDIP 4.1—integrative database of human microRNA target predictions
por: Tokar, Tomas, et al.
Publicado: (2018)

Gene4Denovo: an integrated database and analytic platform for de novo mutations in humans
por: Zhao, Guihu, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_9rtajc2j0mg5oc7o3n6qk2ikdp