The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.

Acanthopanax trifoliatus (Linn.) Merr. is an edible vegetables and medicinal plant from Asian countries. In this study, the complete chloroplast genome of A. trifoliatus was assembled and annotated by high-throughput sequencing. The total chloroplast genome size of A. trifoliatus was 156,716 bp, con...

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Autores principales: Li, Jingyu, Zhou, Fang, Mei, Yu, Gu, Yan, Xu, Shiqang, Cai, Shike, Sun, Mingyang, Wang, Jihua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781875/
https://www.ncbi.nlm.nih.gov/pubmed/33458188
http://dx.doi.org/10.1080/23802359.2020.1823900
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author Li, Jingyu
Zhou, Fang
Mei, Yu
Gu, Yan
Xu, Shiqang
Cai, Shike
Sun, Mingyang
Wang, Jihua
author_facet Li, Jingyu
Zhou, Fang
Mei, Yu
Gu, Yan
Xu, Shiqang
Cai, Shike
Sun, Mingyang
Wang, Jihua
author_sort Li, Jingyu
collection PubMed
description Acanthopanax trifoliatus (Linn.) Merr. is an edible vegetables and medicinal plant from Asian countries. In this study, the complete chloroplast genome of A. trifoliatus was assembled and annotated by high-throughput sequencing. The total chloroplast genome size of A. trifoliatus was 156,716 bp, containing a large single-copy (LSC) region of 86,672 bp, a small single-copy (SSC) region of 18,174 bp, and a pair of inverted repeat regions of 25,935 bp. A total of 134 genes were predicted in the chloroplast genome of A. trifoliatus, including 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that A. trifoliatus was closely related to Eleutherococcus gracilistylus.
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spelling pubmed-77818752021-01-14 The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr. Li, Jingyu Zhou, Fang Mei, Yu Gu, Yan Xu, Shiqang Cai, Shike Sun, Mingyang Wang, Jihua Mitochondrial DNA B Resour MitoGenome Announcement Acanthopanax trifoliatus (Linn.) Merr. is an edible vegetables and medicinal plant from Asian countries. In this study, the complete chloroplast genome of A. trifoliatus was assembled and annotated by high-throughput sequencing. The total chloroplast genome size of A. trifoliatus was 156,716 bp, containing a large single-copy (LSC) region of 86,672 bp, a small single-copy (SSC) region of 18,174 bp, and a pair of inverted repeat regions of 25,935 bp. A total of 134 genes were predicted in the chloroplast genome of A. trifoliatus, including 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that A. trifoliatus was closely related to Eleutherococcus gracilistylus. Taylor & Francis 2020-09-23 /pmc/articles/PMC7781875/ /pubmed/33458188 http://dx.doi.org/10.1080/23802359.2020.1823900 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Li, Jingyu
Zhou, Fang
Mei, Yu
Gu, Yan
Xu, Shiqang
Cai, Shike
Sun, Mingyang
Wang, Jihua
The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.
title The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.
title_full The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.
title_fullStr The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.
title_full_unstemmed The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.
title_short The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.
title_sort complete chloroplast genome sequence of acanthopanax trifoliatus (linn.) merr.
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781875/
https://www.ncbi.nlm.nih.gov/pubmed/33458188
http://dx.doi.org/10.1080/23802359.2020.1823900
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