Cargando…
The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae)
We determined the complete mitochondrial genome of Batillaria cumingi. The B. cumingi mitochondrial genome is 16,100 bp in length, comprising 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The nucleotide composition for B. cumingi is 17.5% of C, 16.88% of G, 35.3% of T,...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781879/ https://www.ncbi.nlm.nih.gov/pubmed/33457788 http://dx.doi.org/10.1080/23802359.2020.1772685 |
_version_ | 1783631769280446464 |
---|---|
author | Yan, Chengrui Feng, Jiantong Ye, Yingying Li, Jiji Guo, Baoying |
author_facet | Yan, Chengrui Feng, Jiantong Ye, Yingying Li, Jiji Guo, Baoying |
author_sort | Yan, Chengrui |
collection | PubMed |
description | We determined the complete mitochondrial genome of Batillaria cumingi. The B. cumingi mitochondrial genome is 16,100 bp in length, comprising 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The nucleotide composition for B. cumingi is 17.5% of C, 16.88% of G, 35.3% of T, and 30.31% of A. In 13 protein-coding genes, all genes start with ATG. For the stop codon, the cox2 gene stops with TTC, the cytb, nad1, and nad2 genes stop with TAG, and the other nine genes are with TAA. Of these 37 genes identified, nine protein-coding genes and six transfer RNA genes are encoded on the heavy strand and the other genes on the light strand. The phylogenetic tree was constructed based on 13 protein-coding genes of the B. cumingi and other 19 Gastropoda species, Sepia latimanus as outgroup using the Neighbour-joining method. The tree showed that the B. cumingi is closely related to the Semisulcospira coreana in Cerithioidea. We believe that this result will be helpful for the study of population genetic and phylogenetic analysis of the family Batillariidae. |
format | Online Article Text |
id | pubmed-7781879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77818792021-01-14 The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) Yan, Chengrui Feng, Jiantong Ye, Yingying Li, Jiji Guo, Baoying Mitochondrial DNA B Resour Mitogenome Announcement We determined the complete mitochondrial genome of Batillaria cumingi. The B. cumingi mitochondrial genome is 16,100 bp in length, comprising 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The nucleotide composition for B. cumingi is 17.5% of C, 16.88% of G, 35.3% of T, and 30.31% of A. In 13 protein-coding genes, all genes start with ATG. For the stop codon, the cox2 gene stops with TTC, the cytb, nad1, and nad2 genes stop with TAG, and the other nine genes are with TAA. Of these 37 genes identified, nine protein-coding genes and six transfer RNA genes are encoded on the heavy strand and the other genes on the light strand. The phylogenetic tree was constructed based on 13 protein-coding genes of the B. cumingi and other 19 Gastropoda species, Sepia latimanus as outgroup using the Neighbour-joining method. The tree showed that the B. cumingi is closely related to the Semisulcospira coreana in Cerithioidea. We believe that this result will be helpful for the study of population genetic and phylogenetic analysis of the family Batillariidae. Taylor & Francis 2020-06-08 /pmc/articles/PMC7781879/ /pubmed/33457788 http://dx.doi.org/10.1080/23802359.2020.1772685 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Yan, Chengrui Feng, Jiantong Ye, Yingying Li, Jiji Guo, Baoying The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) |
title | The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) |
title_full | The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) |
title_fullStr | The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) |
title_full_unstemmed | The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) |
title_short | The complete mitochondrial genome and phylogenetic analysis of Batillaria cumingi (Gastropoda: Batillariidae) |
title_sort | complete mitochondrial genome and phylogenetic analysis of batillaria cumingi (gastropoda: batillariidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781879/ https://www.ncbi.nlm.nih.gov/pubmed/33457788 http://dx.doi.org/10.1080/23802359.2020.1772685 |
work_keys_str_mv | AT yanchengrui thecompletemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT fengjiantong thecompletemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT yeyingying thecompletemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT lijiji thecompletemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT guobaoying thecompletemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT yanchengrui completemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT fengjiantong completemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT yeyingying completemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT lijiji completemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae AT guobaoying completemitochondrialgenomeandphylogeneticanalysisofbatillariacumingigastropodabatillariidae |