Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)

Bambusa rigida is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of B. rigida using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in siz...

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Autores principales: Zheng, Ying, Hou, Dan, Zhuo, Juan, Zheng, Renhong, Wang, Yong, Li, Benxiang, Yu, Xuejun, Lin, Xinchun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781895/
https://www.ncbi.nlm.nih.gov/pubmed/33458020
http://dx.doi.org/10.1080/23802359.2020.1793699
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author Zheng, Ying
Hou, Dan
Zhuo, Juan
Zheng, Renhong
Wang, Yong
Li, Benxiang
Yu, Xuejun
Lin, Xinchun
author_facet Zheng, Ying
Hou, Dan
Zhuo, Juan
Zheng, Renhong
Wang, Yong
Li, Benxiang
Yu, Xuejun
Lin, Xinchun
author_sort Zheng, Ying
collection PubMed
description Bambusa rigida is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of B. rigida using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in size with a pair of inverted repeat (IR) regions of 43,587 bp, which separates a large single-copy (LSC) region of 83,036 bp and a small single-copy (SSC) region of 12,875 bp. Plastid genome contains 132 genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 30 cp genomes indicates that B. rigida is closely related to Bambusa ventricosa in Bambuseae.
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spelling pubmed-77818952021-01-14 Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) Zheng, Ying Hou, Dan Zhuo, Juan Zheng, Renhong Wang, Yong Li, Benxiang Yu, Xuejun Lin, Xinchun Mitochondrial DNA B Resour Mitogenome Announcement Bambusa rigida is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of B. rigida using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in size with a pair of inverted repeat (IR) regions of 43,587 bp, which separates a large single-copy (LSC) region of 83,036 bp and a small single-copy (SSC) region of 12,875 bp. Plastid genome contains 132 genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 30 cp genomes indicates that B. rigida is closely related to Bambusa ventricosa in Bambuseae. Taylor & Francis 2020-07-23 /pmc/articles/PMC7781895/ /pubmed/33458020 http://dx.doi.org/10.1080/23802359.2020.1793699 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zheng, Ying
Hou, Dan
Zhuo, Juan
Zheng, Renhong
Wang, Yong
Li, Benxiang
Yu, Xuejun
Lin, Xinchun
Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
title Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
title_full Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
title_fullStr Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
title_full_unstemmed Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
title_short Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
title_sort complete chloroplast genome sequence of bambusa rigida (bambuseae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781895/
https://www.ncbi.nlm.nih.gov/pubmed/33458020
http://dx.doi.org/10.1080/23802359.2020.1793699
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