The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China

The complete chloroplast genome sequence of Semiaquilegia guangxiensis was assembled and the phylogenetic relationship with other species in Trib. Isopyreae was inferred in this study. The chloroplast genome is 164,047 bp in length. A typical quadripartite structure was detected, including two inver...

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Autores principales: Qin, Xin-Mei, Huang, Zhang-Ping, Lu, Yong-Bin, Zhang, Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781921/
https://www.ncbi.nlm.nih.gov/pubmed/33457776
http://dx.doi.org/10.1080/23802359.2020.1773336
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author Qin, Xin-Mei
Huang, Zhang-Ping
Lu, Yong-Bin
Zhang, Qiang
author_facet Qin, Xin-Mei
Huang, Zhang-Ping
Lu, Yong-Bin
Zhang, Qiang
author_sort Qin, Xin-Mei
collection PubMed
description The complete chloroplast genome sequence of Semiaquilegia guangxiensis was assembled and the phylogenetic relationship with other species in Trib. Isopyreae was inferred in this study. The chloroplast genome is 164,047 bp in length. A typical quadripartite structure was detected, including two inverted repeats (IRs) of 29,581 bp, which are separated by a large single-copy (LSC) and a small single-copy (SSC) of 87,490 bp and 17,395 bp, respectively. Moreover, The genome comprises 132 genes, including 88 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The overall GC content of the chloroplast genome is 38.9%. The phylogenetic analysis indicated that S. guangxiensis is most closely related to its congener S. adoxoides, and Semiaquilegia is most closely related to Aquilegia in Ranunculaceae.
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spelling pubmed-77819212021-01-14 The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China Qin, Xin-Mei Huang, Zhang-Ping Lu, Yong-Bin Zhang, Qiang Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Semiaquilegia guangxiensis was assembled and the phylogenetic relationship with other species in Trib. Isopyreae was inferred in this study. The chloroplast genome is 164,047 bp in length. A typical quadripartite structure was detected, including two inverted repeats (IRs) of 29,581 bp, which are separated by a large single-copy (LSC) and a small single-copy (SSC) of 87,490 bp and 17,395 bp, respectively. Moreover, The genome comprises 132 genes, including 88 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The overall GC content of the chloroplast genome is 38.9%. The phylogenetic analysis indicated that S. guangxiensis is most closely related to its congener S. adoxoides, and Semiaquilegia is most closely related to Aquilegia in Ranunculaceae. Taylor & Francis 2020-06-05 /pmc/articles/PMC7781921/ /pubmed/33457776 http://dx.doi.org/10.1080/23802359.2020.1773336 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qin, Xin-Mei
Huang, Zhang-Ping
Lu, Yong-Bin
Zhang, Qiang
The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China
title The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China
title_full The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China
title_fullStr The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China
title_full_unstemmed The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China
title_short The complete chloroplast genome of Semiaquilegia guangxiensis, a rare and endemic herb in Guangxi, China
title_sort complete chloroplast genome of semiaquilegia guangxiensis, a rare and endemic herb in guangxi, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781921/
https://www.ncbi.nlm.nih.gov/pubmed/33457776
http://dx.doi.org/10.1080/23802359.2020.1773336
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