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The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae)
The complete mitochondrial genome (mitogenome) of the Inimicus japonicus was analyzed by next-generation sequencing in this study. The mitogenome is 16,978 base pairs (bp) long and codes for 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 1 non-coding...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781928/ https://www.ncbi.nlm.nih.gov/pubmed/33458087 http://dx.doi.org/10.1080/23802359.2020.1800424 |
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author | Kim, Hyo-Won Kim, Jung-Hyun Kim, Jae Hoon Jeong, Min-Hwan Ji, Seung-Cheol Kim, Moo-Sang Myeong, Jeong-In Kim, Dae-Jung |
author_facet | Kim, Hyo-Won Kim, Jung-Hyun Kim, Jae Hoon Jeong, Min-Hwan Ji, Seung-Cheol Kim, Moo-Sang Myeong, Jeong-In Kim, Dae-Jung |
author_sort | Kim, Hyo-Won |
collection | PubMed |
description | The complete mitochondrial genome (mitogenome) of the Inimicus japonicus was analyzed by next-generation sequencing in this study. The mitogenome is 16,978 base pairs (bp) long and codes for 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 1 non-coding control region. The overall nucleotide composition of the mitogenome is: 29.61% for A, 29.16% for T, 25.26% for C, and 15.97% for G. Twenty-two tRNAs range from 67 to 74 bp in length, and 2 rRNA (12S and 16S) were 953 and 1,687 bp long, respectively. Phylogenetic analysis by neighbor-joining (NJ) method indicated that I. japonicus showed considerable genetic similarity (82%), and had a closer relationship in the phylogenetic tree to Synanceia verrucosa. |
format | Online Article Text |
id | pubmed-7781928 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77819282021-01-14 The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) Kim, Hyo-Won Kim, Jung-Hyun Kim, Jae Hoon Jeong, Min-Hwan Ji, Seung-Cheol Kim, Moo-Sang Myeong, Jeong-In Kim, Dae-Jung Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome (mitogenome) of the Inimicus japonicus was analyzed by next-generation sequencing in this study. The mitogenome is 16,978 base pairs (bp) long and codes for 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 1 non-coding control region. The overall nucleotide composition of the mitogenome is: 29.61% for A, 29.16% for T, 25.26% for C, and 15.97% for G. Twenty-two tRNAs range from 67 to 74 bp in length, and 2 rRNA (12S and 16S) were 953 and 1,687 bp long, respectively. Phylogenetic analysis by neighbor-joining (NJ) method indicated that I. japonicus showed considerable genetic similarity (82%), and had a closer relationship in the phylogenetic tree to Synanceia verrucosa. Taylor & Francis 2020-08-07 /pmc/articles/PMC7781928/ /pubmed/33458087 http://dx.doi.org/10.1080/23802359.2020.1800424 Text en © 2020 National Institute of Fisheries Science. Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Kim, Hyo-Won Kim, Jung-Hyun Kim, Jae Hoon Jeong, Min-Hwan Ji, Seung-Cheol Kim, Moo-Sang Myeong, Jeong-In Kim, Dae-Jung The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) |
title | The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) |
title_full | The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) |
title_fullStr | The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) |
title_full_unstemmed | The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) |
title_short | The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae) |
title_sort | complete mitochondrial genome sequence and phylogenetic analysis for inimicus japonicus (scorpaeniformes: synanceiidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781928/ https://www.ncbi.nlm.nih.gov/pubmed/33458087 http://dx.doi.org/10.1080/23802359.2020.1800424 |
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