Cargando…
The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties
Annona muricata L. (A. muricata) is an important tropical fruit and medicinal plant. It is one of the easily found plants used traditionally in treating cancer. In many tropical countries, especially in Southeast Asia, A. muricata is popular for its edible fruit and medicinal merits. In this study,...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781942/ https://www.ncbi.nlm.nih.gov/pubmed/33458156 http://dx.doi.org/10.1080/23802359.2020.1820394 |
_version_ | 1783631784413495296 |
---|---|
author | Niu, Ying-Feng Li, Kai-Xiong Liu, Jin |
author_facet | Niu, Ying-Feng Li, Kai-Xiong Liu, Jin |
author_sort | Niu, Ying-Feng |
collection | PubMed |
description | Annona muricata L. (A. muricata) is an important tropical fruit and medicinal plant. It is one of the easily found plants used traditionally in treating cancer. In many tropical countries, especially in Southeast Asia, A. muricata is popular for its edible fruit and medicinal merits. In this study, the complete chloroplast genome of A. muricata was sequenced, assembled, and annotated. The chloroplast genome of A. muricata was found to be a double strand ring structure with the size of 196,038 bp that consists of four regions: a large single-copy region of 75,339 bp, a small single-copy region of 3105 bp, and two inverted repeat regions of 58,797 bp. The GC content of the whole chloroplast genome was 39.92%. It was found that 111 protein-coding genes, one Pseudogene, 38 tRNA genes, and eight rRNA genes were annotated in the chloroplast genome, and the total number of genes was 158. DNA sequences of the chloroplast genomes of 19 species which belonged to three families of Magnoliales order were analyzed and a phylogenetic tree was constructed. The result indicated that A. muricata, Annona cherimola, Uvaria macrophylla, Greenwayodendron suaveolens, and Chieniodendron hainanense had a close phylogenetic relationship. The findings also provided abundant basic data for the genomics study of A. muricata. |
format | Online Article Text |
id | pubmed-7781942 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77819422021-01-14 The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties Niu, Ying-Feng Li, Kai-Xiong Liu, Jin Mitochondrial DNA B Resour Mitogenome Announcement Annona muricata L. (A. muricata) is an important tropical fruit and medicinal plant. It is one of the easily found plants used traditionally in treating cancer. In many tropical countries, especially in Southeast Asia, A. muricata is popular for its edible fruit and medicinal merits. In this study, the complete chloroplast genome of A. muricata was sequenced, assembled, and annotated. The chloroplast genome of A. muricata was found to be a double strand ring structure with the size of 196,038 bp that consists of four regions: a large single-copy region of 75,339 bp, a small single-copy region of 3105 bp, and two inverted repeat regions of 58,797 bp. The GC content of the whole chloroplast genome was 39.92%. It was found that 111 protein-coding genes, one Pseudogene, 38 tRNA genes, and eight rRNA genes were annotated in the chloroplast genome, and the total number of genes was 158. DNA sequences of the chloroplast genomes of 19 species which belonged to three families of Magnoliales order were analyzed and a phylogenetic tree was constructed. The result indicated that A. muricata, Annona cherimola, Uvaria macrophylla, Greenwayodendron suaveolens, and Chieniodendron hainanense had a close phylogenetic relationship. The findings also provided abundant basic data for the genomics study of A. muricata. Taylor & Francis 2020-09-16 /pmc/articles/PMC7781942/ /pubmed/33458156 http://dx.doi.org/10.1080/23802359.2020.1820394 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Niu, Ying-Feng Li, Kai-Xiong Liu, Jin The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties |
title | The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties |
title_full | The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties |
title_fullStr | The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties |
title_full_unstemmed | The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties |
title_short | The complete chloroplast genome of Annona muricata L.: a tropical fruit with important medicinal properties |
title_sort | complete chloroplast genome of annona muricata l.: a tropical fruit with important medicinal properties |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781942/ https://www.ncbi.nlm.nih.gov/pubmed/33458156 http://dx.doi.org/10.1080/23802359.2020.1820394 |
work_keys_str_mv | AT niuyingfeng thecompletechloroplastgenomeofannonamuricatalatropicalfruitwithimportantmedicinalproperties AT likaixiong thecompletechloroplastgenomeofannonamuricatalatropicalfruitwithimportantmedicinalproperties AT liujin thecompletechloroplastgenomeofannonamuricatalatropicalfruitwithimportantmedicinalproperties AT niuyingfeng completechloroplastgenomeofannonamuricatalatropicalfruitwithimportantmedicinalproperties AT likaixiong completechloroplastgenomeofannonamuricatalatropicalfruitwithimportantmedicinalproperties AT liujin completechloroplastgenomeofannonamuricatalatropicalfruitwithimportantmedicinalproperties |