The complete chloroplast genome of agave hybrid 11648

Agave hybrid 11648 is the most widely cultivated agave variety for sisal fiber production around the world. In the present study, we have successfully sequenced the chloroplast genome of A. H11648. The complete chloroplast genome size is 157,274 bp in length with a GC content of 37.8%. The genome co...

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Detalles Bibliográficos
Autores principales: Jin, Gang, Huang, Xing, Chen, Tao, Qin, Xu, Xi, Jingen, Yi, Kexian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781945/
https://www.ncbi.nlm.nih.gov/pubmed/33457785
http://dx.doi.org/10.1080/23802359.2020.1775145
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author Jin, Gang
Huang, Xing
Chen, Tao
Qin, Xu
Xi, Jingen
Yi, Kexian
author_facet Jin, Gang
Huang, Xing
Chen, Tao
Qin, Xu
Xi, Jingen
Yi, Kexian
author_sort Jin, Gang
collection PubMed
description Agave hybrid 11648 is the most widely cultivated agave variety for sisal fiber production around the world. In the present study, we have successfully sequenced the chloroplast genome of A. H11648. The complete chloroplast genome size is 157,274 bp in length with a GC content of 37.8%. The genome contains a large single copy region (LSC) of 85,896 bp, a small single copy region (SSC) of 18,230 bp, and a pair of inverted repeat regions (IR) of 26,574 bp. 121 genes are annotated in the chloroplast genome. The numbers of protein-coding, tRNA and rRNA genes are 99, 40 and 8, respectively. Phylogenetic tree reveals that A. H11648 is closely related to A. americana.
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spelling pubmed-77819452021-01-14 The complete chloroplast genome of agave hybrid 11648 Jin, Gang Huang, Xing Chen, Tao Qin, Xu Xi, Jingen Yi, Kexian Mitochondrial DNA B Resour Mitogenome Announcement Agave hybrid 11648 is the most widely cultivated agave variety for sisal fiber production around the world. In the present study, we have successfully sequenced the chloroplast genome of A. H11648. The complete chloroplast genome size is 157,274 bp in length with a GC content of 37.8%. The genome contains a large single copy region (LSC) of 85,896 bp, a small single copy region (SSC) of 18,230 bp, and a pair of inverted repeat regions (IR) of 26,574 bp. 121 genes are annotated in the chloroplast genome. The numbers of protein-coding, tRNA and rRNA genes are 99, 40 and 8, respectively. Phylogenetic tree reveals that A. H11648 is closely related to A. americana. Taylor & Francis 2020-06-04 /pmc/articles/PMC7781945/ /pubmed/33457785 http://dx.doi.org/10.1080/23802359.2020.1775145 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jin, Gang
Huang, Xing
Chen, Tao
Qin, Xu
Xi, Jingen
Yi, Kexian
The complete chloroplast genome of agave hybrid 11648
title The complete chloroplast genome of agave hybrid 11648
title_full The complete chloroplast genome of agave hybrid 11648
title_fullStr The complete chloroplast genome of agave hybrid 11648
title_full_unstemmed The complete chloroplast genome of agave hybrid 11648
title_short The complete chloroplast genome of agave hybrid 11648
title_sort complete chloroplast genome of agave hybrid 11648
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781945/
https://www.ncbi.nlm.nih.gov/pubmed/33457785
http://dx.doi.org/10.1080/23802359.2020.1775145
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