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The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)

Knema linifolia is a member of Myristicaceae. The K. linifolia chloroplast genome is found to be 155,754 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.89%), and T (30.79%). The genome contained two short inverted repeat (IRa and IRb) regions (48,080 bp) which were separate...

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Autores principales: Li, Xiao-Qin, Zhang, Feng-Liang, Mao, Chang-Li, Yang, Tian, Zhao, Qi, Wu, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781947/
https://www.ncbi.nlm.nih.gov/pubmed/33457994
http://dx.doi.org/10.1080/23802359.2020.1791747
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author Li, Xiao-Qin
Zhang, Feng-Liang
Mao, Chang-Li
Yang, Tian
Zhao, Qi
Wu, Yu
author_facet Li, Xiao-Qin
Zhang, Feng-Liang
Mao, Chang-Li
Yang, Tian
Zhao, Qi
Wu, Yu
author_sort Li, Xiao-Qin
collection PubMed
description Knema linifolia is a member of Myristicaceae. The K. linifolia chloroplast genome is found to be 155,754 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.89%), and T (30.79%). The genome contained two short inverted repeat (IRa and IRb) regions (48,080 bp) which were separated by a large single copy (LSC) region (86,991 bp) and a small single copy (SSC) region (20,683 bp). The chloroplast genome has 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. linifolia was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. linifolia.
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spelling pubmed-77819472021-01-14 The complete chloroplast genome sequence of Knema linifolia (Myristicaceae) Li, Xiao-Qin Zhang, Feng-Liang Mao, Chang-Li Yang, Tian Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Knema linifolia is a member of Myristicaceae. The K. linifolia chloroplast genome is found to be 155,754 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.89%), and T (30.79%). The genome contained two short inverted repeat (IRa and IRb) regions (48,080 bp) which were separated by a large single copy (LSC) region (86,991 bp) and a small single copy (SSC) region (20,683 bp). The chloroplast genome has 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. linifolia was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. linifolia. Taylor & Francis 2020-07-22 /pmc/articles/PMC7781947/ /pubmed/33457994 http://dx.doi.org/10.1080/23802359.2020.1791747 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Xiao-Qin
Zhang, Feng-Liang
Mao, Chang-Li
Yang, Tian
Zhao, Qi
Wu, Yu
The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)
title The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)
title_full The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)
title_fullStr The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)
title_short The complete chloroplast genome sequence of Knema linifolia (Myristicaceae)
title_sort complete chloroplast genome sequence of knema linifolia (myristicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781947/
https://www.ncbi.nlm.nih.gov/pubmed/33457994
http://dx.doi.org/10.1080/23802359.2020.1791747
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