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The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea
The complete chloroplast (cp) genome sequence of LHeucanthemella linearis was newly analyzed in this study. It was 151,395 bp in length and was a typical circular structure composed of a large single-copy region (LSC) (83,080 bp) and a small single-copy (SSC) region (18,391 bp) which were separated...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781948/ https://www.ncbi.nlm.nih.gov/pubmed/33458169 http://dx.doi.org/10.1080/23802359.2020.1821819 |
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author | Kim, Hyoung Tae Kim, Jung Sung |
author_facet | Kim, Hyoung Tae Kim, Jung Sung |
author_sort | Kim, Hyoung Tae |
collection | PubMed |
description | The complete chloroplast (cp) genome sequence of LHeucanthemella linearis was newly analyzed in this study. It was 151,395 bp in length and was a typical circular structure composed of a large single-copy region (LSC) (83,080 bp) and a small single-copy (SSC) region (18,391 bp) which were separated by two inverted repeat regions (24,962 bp). It was totally 6 bp shorter than the Chinese L. linearis cp genome and was composed of 132 genes. There were four regional specific Indels between them in the LSC region as well as 20 bp insertion in the intergenic spacer region excluding poly-A/T sequence variation. And it was clear that both of Luecanthemella linearis were sister to Chrysanthemum – Artemisia groups and their phylogenetic relationship from this study. |
format | Online Article Text |
id | pubmed-7781948 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77819482021-01-14 The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea Kim, Hyoung Tae Kim, Jung Sung Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast (cp) genome sequence of LHeucanthemella linearis was newly analyzed in this study. It was 151,395 bp in length and was a typical circular structure composed of a large single-copy region (LSC) (83,080 bp) and a small single-copy (SSC) region (18,391 bp) which were separated by two inverted repeat regions (24,962 bp). It was totally 6 bp shorter than the Chinese L. linearis cp genome and was composed of 132 genes. There were four regional specific Indels between them in the LSC region as well as 20 bp insertion in the intergenic spacer region excluding poly-A/T sequence variation. And it was clear that both of Luecanthemella linearis were sister to Chrysanthemum – Artemisia groups and their phylogenetic relationship from this study. Taylor & Francis 2020-09-17 /pmc/articles/PMC7781948/ /pubmed/33458169 http://dx.doi.org/10.1080/23802359.2020.1821819 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Kim, Hyoung Tae Kim, Jung Sung The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea |
title | The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea |
title_full | The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea |
title_fullStr | The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea |
title_full_unstemmed | The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea |
title_short | The complete chloroplast genome sequence of Leucanthemella linearis (Matsum. ex Matsum.) Tzvelev (Asteraceae), endangered plant of Korea |
title_sort | complete chloroplast genome sequence of leucanthemella linearis (matsum. ex matsum.) tzvelev (asteraceae), endangered plant of korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781948/ https://www.ncbi.nlm.nih.gov/pubmed/33458169 http://dx.doi.org/10.1080/23802359.2020.1821819 |
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